Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.


Originally published in Science Express on 19 October 2006
Science 10 November 2006:
Vol. 314. no. 5801, pp. 989 - 992
DOI: 10.1126/science.1133807

Reports

HTRA1 Promoter Polymorphism in Wet Age-Related Macular Degeneration

Andrew DeWan,1 Mugen Liu,2* Stephen Hartman,3* Samuel Shao-Min Zhang,2* David T. L. Liu,4 Connie Zhao,5 Pancy O. S. Tam,4 Wai Man Chan,4 Dennis S. C. Lam,4 Michael Snyder,3 Colin Barnstable,2 Chi Pui Pang,4 Josephine Hoh1,2{dagger}

Age-related macular degeneration (AMD), the most common cause of irreversible vision loss in individuals aged older than 50 years, is classified as either wet (neovascular) or dry (nonneovascular). Inherited variation in the complement factor H gene is a major risk factor for drusen in dry AMD. Here we report that a single-nucleotide polymorphism in the promoter region of HTRA1, a serine protease gene on chromosome 10q26, is a major genetic risk factor for wet AMD. A whole-genome association mapping strategy was applied to a Chinese population, yielding a P value of <10–11. Individuals with the risk-associated genotype were estimated to have a likelihood of developing wet AMD 10 times that of individuals with the wild-type genotype.

1 Department of Epidemiology and Public Health, Yale University, 60 College Street, New Haven, CT 06520, USA.
2 Department of Ophthalmology and Visual Science, Yale University, 330 Cedar Street, New Haven, CT 06520, USA.
3 Department of Molecular, Cellular, and Developmental Biology, Yale University, 219 Prospect Street, New Haven, CT 06520, USA.
4 Department of Ophthalmology and Visual Sciences, The Chinese University of Hong Kong, Hong Kong, China.
5 Genomics Resource Center, Rockefeller University, 1230 York Avenue, New York, NY 10021, USA.

* These authors contributed equally to this work.

{dagger} To whom correspondence should be addressed. E-mail: josephine.hoh{at}yale.edu

Read the Full Text


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Rapid inexpensive genome-wide association using pooled whole blood.
J. E. Craig, A. W. Hewitt, A. E. McMellon, A. K. Henders, L. Ma, L. Wallace, S. Sharma, K. P. Burdon, P. M. Visscher, G. W. Montgomery, et al. (2009)
Genome Res. 19, 2075-2080
   Abstract »    Full Text »    PDF »
Identification of a Novel HtrA1-susceptible Cleavage Site in Human Aggrecan: EVIDENCE FOR THE INVOLVEMENT OF HtrA1 IN AGGRECAN PROTEOLYSIS IN VIVO.
A. Chamberland, E. Wang, A. R. Jones, L. A. Collins-Racie, E. R. LaVallie, Y. Huang, L. Liu, E. A. Morris, C. R. Flannery, and Z. Yang (2009)
J. Biol. Chem. 284, 27352-27359
   Abstract »    Full Text »    PDF »
Enhanced HtrA2/Omi Expression in Oxidative Injury to Retinal Pigment Epithelial Cells and Murine Models of Neurodegeneration.
X. Ding, M. Patel, D. Shen, A. A. Herzlich, X. Cao, R. Villasmil, K. Klupsch, J. Tuo, J. Downward, and C.-C. Chan (2009)
Invest. Ophthalmol. Vis. Sci. 50, 4957-4966
   Abstract »    Full Text »    PDF »
Identifying regulatory elements in eukaryotic genomes.
L. Narlikar and I. Ovcharenko (2009)
Brief Funct Genomic Proteomic 8, 215-230
   Abstract »    Full Text »    PDF »
Localization of Age-Related Macular Degeneration-Associated ARMS2 in Cytosol, Not Mitochondria.
G. Wang, K. L. Spencer, B. L. Court, L. M. Olson, W. K. Scott, J. L. Haines, and M. A. Pericak-Vance (2009)
Invest. Ophthalmol. Vis. Sci. 50, 3084-3090
   Abstract »    Full Text »    PDF »
Biologically Active Fibronectin Fragments Stimulate Release of MCP-1 and Catabolic Cytokines from Murine Retinal Pigment Epithelium.
B. A. Austin, B. Liu, Z. Li, and R. B. Nussenblatt (2009)
Invest. Ophthalmol. Vis. Sci. 50, 2896-2902
   Abstract »    Full Text »    PDF »
Assessing Susceptibility to Age-related Macular Degeneration with Proteomic and Genomic Biomarkers.
J. Gu, G. J. T. Pauer, X. Yue, U. Narendra, G. M. Sturgill, J. Bena, X. Gu, N. S. Peachey, R. G. Salomon, S. A. Hagstrom, et al. (2009)
Mol. Cell. Proteomics 8, 1338-1349
   Abstract »    Full Text »    PDF »
Genetic architecture of quantitative traits in mice, flies, and humans.
J. Flint and T. F.C. Mackay (2009)
Genome Res. 19, 723-733
   Abstract »    Full Text »    PDF »
Prediction Model for Prevalence and Incidence of Advanced Age-Related Macular Degeneration Based on Genetic, Demographic, and Environmental Variables.
J. M. Seddon, R. Reynolds, J. Maller, J. A. Fagerness, M. J. Daly, and B. Rosner (2009)
Invest. Ophthalmol. Vis. Sci. 50, 2044-2053
   Abstract »    Full Text »    PDF »
Polymorphisms in C2, CFB and C3 are associated with progression to advanced age related macular degeneration associated with visual loss.
P J Francis, S C Hamon, J Ott, R G Weleber, and M L Klein (2009)
J. Med. Genet. 46, 300-307
   Abstract »    Full Text »    PDF »
Association of HTRA1 Mutations and Familial Ischemic Cerebral Small-Vessel Disease.
K. Hara, A. Shiga, T. Fukutake, H. Nozaki, A. Miyashita, A. Yokoseki, H. Kawata, A. Koyama, K. Arima, T. Takahashi, et al. (2009)
N. Engl. J. Med. 360, 1729-1739
   Abstract »    Full Text »    PDF »
Large scale replication and meta-analysis of variants on chromosome 4q25 associated with atrial fibrillation.
S. Kaab, D. Darbar, C. van Noord, J. Dupuis, A. Pfeufer, C. Newton-Cheh, R. Schnabel, S. Makino, M. F. Sinner, P. J. Kannankeril, et al. (2009)
Eur. Heart J. 30, 813-819
   Abstract »    Full Text »    PDF »
Further Assessment of the Complement Component 2 and Factor B Region Associated with Age-Related Macular Degeneration.
G. J. McKay, G. Silvestri, C. C. Patterson, R. E. Hogg, U. Chakravarthy, and A. E. Hughes (2009)
Invest. Ophthalmol. Vis. Sci. 50, 533-539
   Abstract »    Full Text »    PDF »
Peripheral Retinal Drusen and Reticular Pigment: Association with CFHY402H and CFHrs1410996 Genotypes in Family and Twin Studies.
J. M. Seddon, R. Reynolds, and B. Rosner (2009)
Invest. Ophthalmol. Vis. Sci. 50, 586-591
   Abstract »    Full Text »    PDF »
Photodynamic therapy with verteporfin for age-related macular degeneration or polypoidal choroidal vasculopathy: comparison of the presence of serous retinal pigment epithelial detachment.
M Saito, T Iida, and D Nagayama (2008)
Br J Ophthalmol 92, 1642-1647
   Abstract »    Full Text »    PDF »
Analysis of Major Alleles Associated With Age-Related Macular Degeneration in Patients With Multifocal Choroiditis: Strong Association With Complement Factor H.
D. C. Ferrara, J. E. Merriam, K. B. Freund, R. F. Spaide, B. S. Takahashi, I. Zhitomirsky, H. F. Fine, L. A. Yannuzzi, and R. Allikmets (2008)
Arch Ophthalmol 126, 1562-1566
   Abstract »    Full Text »    PDF »
Toll-like Receptor 3 and Geographic Atrophy in Age-Related Macular Degeneration.
Z. Yang, C. Stratton, P. J. Francis, M. E. Kleinman, P. L. Tan, D. Gibbs, Z. Tong, H. Chen, R. Constantine, X. Yang, et al. (2008)
N. Engl. J. Med. 359, 1456-1463
   Abstract »    Full Text »    PDF »
Rhesus monkeys and humans share common susceptibility genes for age-related macular disease.
P. J. Francis, B. Appukuttan, E. Simmons, N. Landauer, J. Stoddard, S. Hamon, J. Ott, B. Ferguson, M. Klein, J. T. Stout, et al. (2008)
Hum. Mol. Genet. 17, 2673-2680
   Abstract »    Full Text »    PDF »
Multiple Gene Polymorphisms in the Complement Factor H Gene Are Associated with Exudative Age-Related Macular Degeneration in Chinese.
T. K. Ng, L. J. Chen, D. T. L. Liu, P. O. S. Tam, W. M. Chan, K. Liu, Y. J. Hu, K. K. L. Chong, C. S. L. Lau, S. W. Y. Chiang, et al. (2008)
Invest. Ophthalmol. Vis. Sci. 49, 3312-3317
   Abstract »    Full Text »    PDF »
Genotype-Phenotype Correlations for Exudative Age-Related Macular Degeneration Associated with Homozygous HTRA1 and CFH Genotypes.
N. Leveziel, J. Zerbib, F. Richard, G. Querques, G. Morineau, V. Fremeaux-Bacchi, G. Coscas, G. Soubrane, P. Benlian, and E. H. Souied (2008)
Invest. Ophthalmol. Vis. Sci. 49, 3090-3094
   Abstract »    Full Text »    PDF »
Prevalence and Associated Risk Factors of Age-Related Macular Degeneration in an Elderly Chinese Population in Taiwan: The Shihpai Eye Study.
S.-J. Chen, C.-Y. Cheng, K.-L. Peng, A.-F. Li, W.-M. Hsu, J.-H. Liu, and P. Chou (2008)
Invest. Ophthalmol. Vis. Sci. 49, 3126-3133
   Abstract »    Full Text »    PDF »
Altered Function of Factor I Caused by Amyloid {beta}: Implication for Pathogenesis of Age-Related Macular Degeneration from Drusen.
J. Wang, K. Ohno-Matsui, T. Yoshida, A. Kojima, N. Shimada, K.-i. Nakahama, O. Safranova, N. Iwata, T. C. Saido, M. Mochizuki, et al. (2008)
J. Immunol. 181, 712-720
   Abstract »    Full Text »    PDF »
C3 R102G polymorphism increases risk of age-related macular degeneration.
K. L. Spencer, L. M. Olson, B. M. Anderson, N. Schnetz-Boutaud, W. K. Scott, P. Gallins, A. Agarwal, E. A. Postel, M. A. Pericak-Vance, and J. L. Haines (2008)
Hum. Mol. Genet. 17, 1821-1824
   Abstract »    Full Text »    PDF »
Association Analysis of CFH, C2, BF, and HTRA1 Gene Polymorphisms in Chinese Patients with Polypoidal Choroidal Vasculopathy.
K. Y. Lee, E. N. Vithana, R. Mathur, V. H. Yong, I. Y. Yeo, A. Thalamuthu, M.-W. Lee, A. H. Koh, M. C. Lim, A. C. How, et al. (2008)
Invest. Ophthalmol. Vis. Sci. 49, 2613-2619
   Abstract »    Full Text »    PDF »
HTRA1 Variants in Exudative Age-Related Macular Degeneration and Interactions with Smoking and CFH.
P. O. S. Tam, T. K. Ng, D. T. L. Liu, W. M. Chan, S. W. Y. Chiang, L. J. Chen, A. DeWan, J. Hoh, D. S. C. Lam, and C. P. Pang (2008)
Invest. Ophthalmol. Vis. Sci. 49, 2357-2365
   Abstract »    Full Text »    PDF »
Regulation of tumor necrosis factor receptor-1 and the IKK-NF-{kappa}B pathway by LDL receptor-related protein explains the antiinflammatory activity of this receptor.
A. Gaultier, S. Arandjelovic, S. Niessen, C. D. Overton, M. F. Linton, S. Fazio, W. M. Campana, B. F. Cravatt III, and S. L. Gonias (2008)
Blood 111, 5316-5325
   Abstract »    Full Text »    PDF »
Estrogen Receptor Alpha and Matrix Metalloproteinase 2 Polymorphisms and Age-related Maculopathy in Older Women.
R. L. Seitzman, V. B. Mahajan, C. Mangione, J. A. Cauley, K. E. Ensrud, K. L. Stone, S. R. Cummings, M. C. Hochberg, T. A. Hillier, J. S. Sinsheimer, et al. (2008)
Am. J. Epidemiol. 167, 1217-1225
   Abstract »    Full Text »    PDF »
Variants in the 10q26 Gene Cluster (LOC387715 and HTRA1) Exhibit Enhanced Risk of Age-Related Macular Degeneration along with CFH in Indian Patients.
I. Kaur, S. Katta, A. Hussain, N. Hussain, A. Mathai, R. Narayanan, A. Hussain, R. K. Reddy, A. B. Majji, T. Das, et al. (2008)
Invest. Ophthalmol. Vis. Sci. 49, 1771-1776
   Abstract »    Full Text »    PDF »
Menopausal and Reproductive Factors and Risk of Age-Related Macular Degeneration.
D. Feskanich, E. Cho, D. A. Schaumberg, G. A. Colditz, and S. E. Hankinson (2008)
Arch Ophthalmol 126, 519-524
   Abstract »    Full Text »    PDF »
How to Interpret a Genome-wide Association Study.
T. A. Pearson and T. A. Manolio (2008)
JAMA 299, 1335-1344
   Abstract »    Full Text »    PDF »
Elastin Gene Polymorphisms in Neovascular Age-Related Macular Degeneration and Polypoidal Choroidal Vasculopathy.
N. Kondo, S. Honda, K. Ishibashi, Y. Tsukahara, and A. Negi (2008)
Invest. Ophthalmol. Vis. Sci. 49, 1101-1105
   Abstract »    Full Text »    PDF »
HtrA1 Inhibits Mineral Deposition by Osteoblasts: REQUIREMENT FOR THE PROTEASE AND PDZ DOMAINS.
K. D. Hadfield, C. F. Rock, C. A. Inkson, S. L. Dallas, L. Sudre, G. A. Wallis, R. P. Boot-Handford, and A. E. Canfield (2008)
J. Biol. Chem. 283, 5928-5938
   Abstract »    Full Text »    PDF »
A forest-based approach to identifying gene and gene gene interactions.
X. Chen, C.-T. Liu, M. Zhang, and H. Zhang (2007)
PNAS 104, 19199-19203
   Abstract »    Full Text »    PDF »
Novel Retinal and Cone Photoreceptor Transcripts Revealed by Human Macular Expression Profiling.
D. M. Hornan, S. N. Peirson, A. J. Hardcastle, R. S. Molday, M. E. Cheetham, and A. R. Webster (2007)
Invest. Ophthalmol. Vis. Sci. 48, 5388-5396
   Abstract »    Full Text »    PDF »
Coding and Noncoding Variants in the CFH Gene and Cigarette Smoking Influence the Risk of Age-Related Macular Degeneration in a Japanese Population.
K. Mori, P. L. Gehlbach, S. Kabasawa, I. Kawasaki, M. Oosaki, H. Iizuka, S. Katayama, T. Awata, and S. Yoneya (2007)
Invest. Ophthalmol. Vis. Sci. 48, 5315-5319
   Abstract »    Full Text »    PDF »
Bringing the genetics of macular degeneration into focus.
J. L. Haines, K. M. Spencer, and M. A. Pericak-Vance (2007)
PNAS 104, 16725-16726
   Full Text »    PDF »
Genetic susceptibility to age-related macular degeneration: a paradigm for dissecting complex disease traits.
A. Swaroop, K. E. Branham, W. Chen, and G. Abecasis (2007)
Hum. Mol. Genet. 16, R174-R182
   Abstract »    Full Text »    PDF »
The R345W mutation in EFEMP1 is pathogenic and causes AMD-like deposits in mice.
L. Fu, D. Garland, Z. Yang, D. Shukla, A. Rajendran, E. Pearson, E. M. Stone, K. Zhang, and E. A. Pierce (2007)
Hum. Mol. Genet. 16, 2411-2422
   Abstract »    Full Text »    PDF »
A variant of mitochondrial protein LOC387715/ARMS2, not HTRA1, is strongly associated with age-related macular degeneration.
A. Kanda, W. Chen, M. Othman, K. E. H. Branham, M. Brooks, R. Khanna, S. He, R. Lyons, G. R. Abecasis, and A. Swaroop (2007)
PNAS 104, 16227-16232
   Abstract »    Full Text »    PDF »
SOD2 Knockdown Mouse Model of Early AMD.
V. Justilien, J.-J. Pang, K. Renganathan, X. Zhan, J. W. Crabb, S. R. Kim, J. R. Sparrow, W. W. Hauswirth, and A. S. Lewin (2007)
Invest. Ophthalmol. Vis. Sci. 48, 4407-4420
   Abstract »    Full Text »    PDF »
Complement factor H and hemicentin-1 in age-related macular degeneration and renal phenotypes.
C. L. Thompson, B. E.K. Klein, R. Klein, Z. Xu, J. Capriotti, T. Joshi, D. Leontiev, K. E. Lee, R. C. Elston, and S. K. Iyengar (2007)
Hum. Mol. Genet. 16, 2135-2148
   Abstract »    Full Text »    PDF »
Macular Degeneration: Risk Factors for Progression.
J. L. Wiggs (2007)
Arch Ophthalmol 125, 1264-1265
   Full Text »    PDF »
Predictive Value of Multiple Genetic Testing for Age-Related Macular Degeneration.
D. D. G. Despriet, C. C. W. Klaver, C. C. van Duijn, and A. C. J. W. Janssens (2007)
Arch Ophthalmol 125, 1270-1271
   Full Text »    PDF »
A Pharmacogenomics Primer.
M. H. Court (2007)
J. Clin. Pharmacol. 47, 1087-1103
   Abstract »    Full Text »    PDF »
Protective effect of complement factor B and complement component 2 variants in age-related macular degeneration.
K. L. Spencer, M. A. Hauser, L. M. Olson, S. Schmidt, W. K. Scott, P. Gallins, A. Agarwal, E. A. Postel, M. A. Pericak-Vance, and J. L. Haines (2007)
Hum. Mol. Genet. 16, 1986-1992
   Abstract »    Full Text »    PDF »
Complement C3 Variant and the Risk of Age-Related Macular Degeneration.
J. R.W. Yates, T. Sepp, B. K. Matharu, J. C. Khan, D. A. Thurlby, H. Shahid, D. G. Clayton, C. Hayward, J. Morgan, A. F. Wright, et al. (2007)
N. Engl. J. Med. 357, 553-561
   Abstract »    Full Text »    PDF »
Association of CFH Y402H and LOC387715 A69S With Progression of Age-Related Macular Degeneration.
J. M. Seddon, P. J. Francis, S. George, D. W. Schultz, B. Rosner, and M. L. Klein (2007)
JAMA 297, 1793-1800
   Abstract »    Full Text »    PDF »
A Variant of the HTRA1 Gene Increases Susceptibility to Age-Related Macular Degeneration.
Z. Yang, N. J. Camp, H. Sun, Z. Tong, D. Gibbs, D. J. Cameron, H. Chen, Y. Zhao, E. Pearson, X. Li, et al. (2006)
Science 314, 992-993
   Abstract »    Full Text »    PDF »



To Advertise     Find Products


Science. ISSN 0036-8075 (print), 1095-9203 (online)