Related Content
Search Google Scholar for:
More Information
Related Jobs from ScienceCareers
|
|
Science 5 November 2004: Vol. 306. no. 5698, p. 997 DOI: 10.1126/science.1103521
|
|
Brevia
Uridine Addition After MicroRNA-Directed Cleavage
Binzhang Shen and
Howard M. Goodman*
One of the important roles of microRNA (miRNA) is to direct the cleavage of messenger RNA (mRNA). However, the mechanisms of decay of the cleaved mRNA products is not well understood. We show that miRNA-directed cleavage products in organisms as diverse as Arabidopsis, mouse, and Epstein-Barr virus have at their 3' ends a stretch (1 to 24 nucleotides) of oligouridine posttranscriptionally added downstream of the cleavage site. This 3' uridine addition, as shown for Arabidopsis, is correlated with decapping and 5' shortening of the cleaved products, suggesting a mechanistic step in the miRNA-directed mRNA decay mechanism.
Department of Genetics, Harvard Medical School, and Department of Molecular Biology, Massachusetts General Hospital, 50 Blossom Street, Boston, MA 02114, USA.
* To whom correspondence should be addressed. E-mail: goodman{at}molbio.mgh.harvard.edu
Read the Full Text
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- Sequence context outside the target region influences the effectiveness of miR-223 target sites in the RhoB 3'UTR.
- G. Sun, H. Li, and J. J. Rossi (2009)
Nucleic Acids Res.
| Abstract »
| Full Text »
| PDF »
- Structural and biochemical insights into 2'-O-methylation at the 3'-terminal nucleotide of RNA by Hen1.
- C. Mui Chan, C. Zhou, J. S. Brunzelle, and R. H. Huang (2009)
PNAS
106, 17699-17704
| Abstract »
| Full Text »
| PDF »
- A single RNA-dependent RNA polymerase assembles with mutually exclusive nucleotidyl transferase subunits to direct different pathways of small RNA biogenesis.
- S. R. Lee, K. B. Talsky, and K. Collins (2009)
RNA
15, 1363-1374
| Abstract »
| Full Text »
| PDF »
- Meta-analysis of small RNA-sequencing errors reveals ubiquitous post-transcriptional RNA modifications.
- H. A. Ebhardt, H. H. Tsang, D. C. Dai, Y. Liu, B. Bostan, and R. P. Fahlman (2009)
Nucleic Acids Res.
37, 2461-2470
| Abstract »
| Full Text »
| PDF »
- Selective stabilization of mammalian microRNAs by 3' adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2.
- T. Katoh, Y. Sakaguchi, K. Miyauchi, T. Suzuki, S.-i. Kashiwabara, T. Baba, and T. Suzuki (2009)
Genes & Dev.
23, 433-438
| Abstract »
| Full Text »
| PDF »
- Transcripts synthesized by RNA polymerase III can be polyadenylated in an AAUAAA-dependent manner.
- O. R. Borodulina and D. A. Kramerov (2008)
RNA
14, 1865-1873
| Abstract »
| Full Text »
| PDF »
- Characterization of Hypovirus-Derived Small RNAs Generated in the Chestnut Blight Fungus by an Inducible DCL-2-Dependent Pathway.
- X. Zhang, G. C. Segers, Q. Sun, F. Deng, and D. L. Nuss (2008)
J. Virol.
82, 2613-2619
| Abstract »
| Full Text »
| PDF »
- New ways to meet your (3') end oligouridylation as a step on the path to destruction.
- C. J. Wilusz and J. Wilusz (2008)
Genes & Dev.
22, 1-7
| Full Text »
| PDF »
- Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5' to 3' and 3' to 5'.
- T. E. Mullen and W. F. Marzluff (2008)
Genes & Dev.
22, 50-65
| Abstract »
| Full Text »
| PDF »
- 3' Terminal oligo U-tract-mediated stimulation of decapping.
- M.-G. Song and M. Kiledjian (2007)
RNA
13, 2356-2365
| Abstract »
| Full Text »
| PDF »
- RNA-specific ribonucleotidyl transferases.
- G. Martin and W. Keller (2007)
RNA
13, 1834-1849
| Abstract »
| Full Text »
| PDF »
- Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function.
- O. Isken and L. E. Maquat (2007)
Genes & Dev.
21, 1833-3856
| Abstract »
| Full Text »
| PDF »
- A family of poly(U) polymerases.
- J. E. Kwak and M. Wickens (2007)
RNA
13, 860-867
| Abstract »
| Full Text »
| PDF »
- Efficient RNA Polyuridylation by Noncanonical Poly(A) Polymerases.
- O. S. Rissland, A. Mikulasova, and C. J. Norbury (2007)
Mol. Cell. Biol.
27, 3612-3624
| Abstract »
| Full Text »
| PDF »
- Molecular Bases of Viral RNA Targeting by Viral Small Interfering RNA-Programmed RISC.
- V. Pantaleo, G. Szittya, and J. Burgyan (2007)
J. Virol.
81, 3797-3806
| Abstract »
| Full Text »
| PDF »
- Untemplated Oligoadenylation Promotes Degradation of RISC-Cleaved Transcripts.
- F. Ibrahim, J. Rohr, W.-J. Jeong, J. Hesson, and H. Cerutti (2006)
Science
314, 1893
| Abstract »
| Full Text »
| PDF »
- tRNA-dependent cleavage of the ColE1 plasmid-encoded RNA I.
- Z. Wang, Z. Yuan, L. Xiang, J. Shao, and G. Wegrzyn (2006)
Microbiology
152, 3467-3476
| Abstract »
| Full Text »
| PDF »
- Control of translation and mRNA degradation by miRNAs and siRNAs..
- M. A. Valencia-Sanchez, J. Liu, G. J. Hannon, and R. Parker (2006)
Genes & Dev.
20, 515-524
| Abstract »
| Full Text »
| PDF »
- Rampant polyuridylylation of plastid gene transcripts in the dinoflagellate Lingulodinium.
- Y. Wang and D. Morse (2006)
Nucleic Acids Res.
34, 613-619
| Abstract »
| Full Text »
| PDF »
- Molecular characterization of geminivirus-derived small RNAs in different plant species.
- R. Akbergenov, A. Si-Ammour, T. Blevins, I. Amin, C. Kutter, H. Vanderschuren, P. Zhang, W. Gruissem, F. Meins Jr, T. Hohn, et al. (2006)
Nucleic Acids Res.
34, 462-471
| Abstract »
| Full Text »
| PDF »
- A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis.
- M. Yoshikawa, A. Peragine, M. Y. Park, and R. S. Poethig (2005)
Genes & Dev.
19, 2164-2175
| Abstract »
| Full Text »
| PDF »
- Ribo-gnome: The Big World of Small RNAs.
- P. D. Zamore and B. Haley (2005)
Science
309, 1519-1524
| Abstract »
| Full Text »
| PDF »
- microRNA172 down-regulates glossy15 to promote vegetative phase change in maize.
- N. Lauter, A. Kampani, S. Carlson, M. Goebel, and S. P. Moose (2005)
PNAS
102, 9412-9417
| Abstract »
| Full Text »
| PDF »
- UTP-dependent turnover of Trypanosoma brucei mitochondrial mRNA requires UTP polymerization and involves the RET1 TUTase.
- C. M. RYAN and L. K. READ (2005)
RNA
11, 763-773
| Abstract »
| Full Text »
| PDF »
|
|