Related Content
Search Google Scholar for:
More Information
Related Jobs from ScienceCareers
|
|
Science 22 October 2004: Vol. 306. no. 5696, pp. 683 - 685 DOI: 10.1126/science.1099824
|
|
Reports
Mycobacterial Ku and Ligase Proteins Constitute a Two-Component NHEJ Repair Machine
Marina Della,1*
Phillip L. Palmbos,2
Hui-Min Tseng,3
Louise M. Tonkin,1,4
James M. Daley,2
Leana M. Topper,2
Robert S. Pitcher,4
Alan E. Tomkinson,5
Thomas E. Wilson,2
Aidan J. Doherty4
In mammalian cells, repair of DNA double-strand breaks (DSBs) by nonhomologous end-joining (NHEJ) is critical for genome stability. Although the end-bridging and ligation steps of NHEJ have been reconstituted in vitro, little is known about the end-processing reactions that occur before ligation. Recently, functionally homologous end-bridging and ligation activities have been identified in prokarya. Consistent with its homology to polymerases and nucleases, we demonstrate that DNA ligase D from Mycobacterium tuberculosis (Mt-Lig) possesses a unique variety of nucleotidyl transferase activities, including gap-filling polymerase, terminal transferase, and primase, and is also a 3' to 5' exonuclease. These enzyme activities allow the Mt-Ku and Mt-Lig proteins to join incompatible DSB ends in vitro, as well as to reconstitute NHEJ in vivo in yeast. These results demonstrate that prokaryotic Ku and ligase form a bona fide NHEJ system that encodes all the recognition, processing, and ligation activities required for DSB repair.
1 Cambridge Institute for Medical Research, University of Cambridge, Department of Haematology, Hills Road, Cambridge CB2 2XY, UK.
2 Department of Pathology, University of Michigan Medical School, Ann Arbor, Michigan 481090602, USA.
3 Molecular Medicine Graduate Program, Institute of Biotechnology, The University of Texas Health Science Center at San Antonio, San Antonio, TX 782453207, USA.
4 Genome Damage and Stability Centre, University of Sussex, Falmer, Brighton BN1 9RQ, UK.
5 Department of Radiation Oncology and Greenebaum Cancer Center, University of Maryland School of Medicine, Baltimore, MD 212011559, USA.
* Present address: The Institute of Cancer Research, Chester Beatty Laboratories, London SW3 6JB, UK.
These authors contributed equally to this work.
To whom correspondence should be addressed. E-mail: AJD21{at}sussex.ac.uk
Read the Full Text
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- Bacterial Nonhomologous End Joining Ligases Preferentially Seal Breaks with a 3'-OH Monoribonucleotide.
- H. Zhu and S. Shuman (2008)
J. Biol. Chem.
283, 8331-8339
| Abstract »
| Full Text »
| PDF »
- Mechanistic flexibility as a conserved theme across 3 billion years of nonhomologous DNA end-joining.
- J. Gu and M. R. Lieber (2008)
Genes & Dev.
22, 411-415
| Full Text »
| PDF »
- The pathways and outcomes of mycobacterial NHEJ depend on the structure of the broken DNA ends.
- J. Aniukwu, M. S. Glickman, and S. Shuman (2008)
Genes & Dev.
22, 512-527
| Abstract »
| Full Text »
| PDF »
- Structure of a NHEJ Polymerase-Mediated DNA Synaptic Complex.
- N. C. Brissett, R. S. Pitcher, R. Juarez, A. J. Picher, A. J. Green, T. R. Dafforn, G. C. Fox, L. Blanco, and A. J. Doherty (2007)
Science
318, 456-459
| Abstract »
| Full Text »
| PDF »
- Ku Heterodimer-Independent End Joining in Trypanosoma brucei Cell Extracts Relies upon Sequence Microhomology.
- P. Burton, D. J. McBride, J. M. Wilkes, J. D. Barry, and R. McCulloch (2007)
Eukaryot. Cell
6, 1773-1781
| Abstract »
| Full Text »
| PDF »
- Mycobacterial Nonhomologous End Joining Mediates Mutagenic Repair of Chromosomal Double-Strand DNA Breaks.
- N. C. Stephanou, F. Gao, P. Bongiorno, S. Ehrt, D. Schnappinger, S. Shuman, and M. S. Glickman (2007)
J. Bacteriol.
189, 5237-5246
| Abstract »
| Full Text »
| PDF »
- Characterization of Agrobacterium tumefaciens DNA ligases C and D.
- H. Zhu and S. Shuman (2007)
Nucleic Acids Res.
35, 3631-3645
| Abstract »
| Full Text »
| PDF »
- Mycobacterial UvrD1 Is a Ku-dependent DNA Helicase That Plays a Role in Multiple DNA Repair Events, Including Double-strand Break Repair.
- K. M. Sinha, N. C. Stephanou, F. Gao, M. S. Glickman, and S. Shuman (2007)
J. Biol. Chem.
282, 15114-15125
| Abstract »
| Full Text »
| PDF »
- Role of DNA Repair by Nonhomologous-End Joining in Bacillus subtilis Spore Resistance to Extreme Dryness, Mono- and Polychromatic UV, and Ionizing Radiation.
- R. Moeller, E. Stackebrandt, G. Reitz, T. Berger, P. Rettberg, A. J. Doherty, G. Horneck, and W. L. Nicholson (2007)
J. Bacteriol.
189, 3306-3311
| Abstract »
| Full Text »
| PDF »
- Nucleotide Misincorporation, 3'-Mismatch Extension, and Responses to Abasic Sites and DNA Adducts by the Polymerase Component of Bacterial DNA Ligase D.
- L. Yakovleva and S. Shuman (2006)
J. Biol. Chem.
281, 25026-25040
| Abstract »
| Full Text »
| PDF »
- Substrate Specificity and Structure-Function Analysis of the 3'-Phosphoesterase Component of the Bacterial NHEJ Protein, DNA Ligase D.
- H. Zhu and S. Shuman (2006)
J. Biol. Chem.
281, 13873-13881
| Abstract »
| Full Text »
| PDF »
- Crystal Structure and Nonhomologous End-joining Function of the Ligase Component of Mycobacterium DNA Ligase D.
- D. Akey, A. Martins, J. Aniukwu, M. S. Glickman, S. Shuman, and J. M. Berger (2006)
J. Biol. Chem.
281, 13412-13423
| Abstract »
| Full Text »
| PDF »
- Atomic structure and nonhomologous end-joining function of the polymerase component of bacterial DNA ligase D.
- H. Zhu, J. Nandakumar, J. Aniukwu, L. K. Wang, M. S. Glickman, C. D. Lima, and S. Shuman (2006)
PNAS
103, 1711-1716
| Abstract »
| Full Text »
| PDF »
- Mutations of the Yku80 C Terminus and Xrs2 FHA Domain Specifically Block Yeast Nonhomologous End Joining.
- P. L. Palmbos, J. M. Daley, and T. E. Wilson (2005)
Mol. Cell. Biol.
25, 10782-10790
| Abstract »
| Full Text »
| PDF »
- Essential Constituents of the 3'-Phosphoesterase Domain of Bacterial DNA Ligase D, a Nonhomologous End-joining Enzyme.
- H. Zhu, L. K. Wang, and S. Shuman (2005)
J. Biol. Chem.
280, 33707-33715
| Abstract »
| Full Text »
| PDF »
- DNA Joint Dependence of Pol X Family Polymerase Action in Nonhomologous End Joining.
- J. M. Daley, R. L. V. Laan, A. Suresh, and T. E. Wilson (2005)
J. Biol. Chem.
280, 29030-29037
| Abstract »
| Full Text »
| PDF »
- Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members.
- L. M. Iyer, E. V. Koonin, D. D. Leipe, and L. Aravind (2005)
Nucleic Acids Res.
33, 3875-3896
| Abstract »
| Full Text »
| PDF »
- Novel 3'-Ribonuclease and 3'-Phosphatase Activities of the Bacterial Non-homologous End-joining Protein, DNA Ligase D.
- H. Zhu and S. Shuman (2005)
J. Biol. Chem.
280, 25973-25981
| Abstract »
| Full Text »
| PDF »
|
|