Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.
HLA and NK Cell Inhibitory Receptor Genes in Resolving Hepatitis C Virus Infection
Salim I. Khakoo,1*Chloe L. Thio,2Maureen P. Martin,3Collin R. Brooks,1Xiaojiang Gao,3Jacquie Astemborski,2Jie Cheng,3James J. Goedert,4David Vlahov,5Margaret Hilgartner,6Steven Cox,7Ann-Margeret Little,7Graeme J. Alexander,8Matthew E. Cramp,9Stephen J. O'Brien,10William M. C. Rosenberg,1David L. Thomas,2Mary Carrington3*
Natural killer (NK) cells provide a central defense againstviral infection by using inhibitory and activation receptorsfor major histocompatibility complex class I molecules as ameans of controlling their activity. We show that genes encodingthe inhibitory NK cell receptor KIR2DL3 and its human leukocyteantigen C group1 (HLA-C1) ligand directly influence resolutionof hepatitis C virus (HCV) infection. This effect was observedin Caucasians and African Americans with expected low infectiousdoses of HCV but not in those with high-dose exposure, in whomthe innate immune response is likely overwhelmed. The data stronglysuggest that inhibitory NK cell interactions are important indetermining antiviral immunity and that diminished inhibitoryresponses confer protection against HCV.
1 Liver Group, Division of Infection, Inflammation, and Repair, Southampton University, Southampton 5016 6YD, UK. 2 Department of Medicine, Johns Hopkins Medical Institutions, Baltimore, MD 21231, USA. 3 Basic Research Program, Scientific Applications International Corporation Frederick, Inc., Laboratory of Genomic Diversity, NCI Frederick, Frederick, MD 21702, USA. 4 Viral Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD 20852, USA. 5 New York Academy of Medicine, New York, NY 10029, USA. 6 Department of Pediatrics, New York Presbyterian HospitalCornell Medical Center, New York, NY 10021, USA. 7 Anthony Nolan Research Institute, The Royal Free Hospital, London NW3 2PF, UK. 8 Department of Medicine, University of Cambridge, Cambridge CD2 2QQ, UK. 9 Department of Gastroenterology, Derriford Hospital, Plymouth PL6 8DH, UK. 10 Laboratory of Genomic Diversity, National Cancer Institute, Frederick, MD 21702, USA.
* To whom correspondence should be addressed: E-mail: carringt{at}ncifcrf.gov (M.C.); sik{at}soton.ac.uk (S.I.K.)
Expansion of Functionally Skewed CD56-Negative NK Cells in Chronic Hepatitis C Virus Infection: Correlation with Outcome of Pegylated IFN-{alpha} and Ribavirin Treatment.
V. D. Gonzalez, K. Falconer, N. K. Bjorkstrom, K. G. Blom, O. Weiland, H.-G. Ljunggren, A. Alaeus, and J. K. Sandberg (2009)
J. Immunol.
183, 6612-6618
|Abstract »|Full Text »|PDF »
Co-evolution of KIR2DL3 with HLA-C in a human population retaining minimal essential diversity of KIR and HLA class I ligands.
K. Gendzekhadze, P. J. Norman, L. Abi-Rached, T. Graef, A. K. Moesta, Z. Layrisse, and P. Parham (2009)
PNAS
106, 18692-18697
|Abstract »|Full Text »|PDF »
Impaired Plasmacytoid Dendritic Cell (PDC)-NK Cell Activity in Viremic Human Immunodeficiency Virus Infection Attributable to Impairments in both PDC and NK Cell Function.
S. J. Conry, K. A. Milkovich, N. L. Yonkers, B. Rodriguez, H. B. Bernstein, R. Asaad, F. P. Heinzel, M. Tary-Lehmann, M. M. Lederman, and D. D. Anthony (2009)
J. Virol.
83, 11175-11187
|Abstract »|Full Text »|PDF »
IPD--the Immuno Polymorphism Database.
J. Robinson, K. Mistry, H. McWilliam, R. Lopez, and S. G. E. Marsh (2009)
Nucleic Acids Res.
|Abstract »|Full Text »|PDF »
Liver natural killer and natural killer T cells: immunobiology and emerging roles in liver diseases.
HLA Class I Subtype-Dependent Expansion of KIR3DS1+ and KIR3DL1+ NK Cells during Acute Human Immunodeficiency Virus Type 1 Infection.
G. Alter, S. Rihn, K. Walter, A. Nolting, M. Martin, E. S. Rosenberg, J. S. Miller, M. Carrington, and M. Altfeld (2009)
J. Virol.
83, 6798-6805
|Abstract »|Full Text »|PDF »
Phenotypic and Functional Analyses of KIR3DL1+ and KIR3DS1+ NK Cell Subsets Demonstrate Differential Regulation by Bw4 Molecules and Induced KIR3DS1 Expression on Stimulated NK Cells.
M. Morvan, C. Willem, K. Gagne, N. Kerdudou, G. David, V. Sebille, G. Follea, J.-D. Bignon, and C. Retiere (2009)
J. Immunol.
182, 6727-6735
|Abstract »|Full Text »|PDF »
The transcription factor c-Myc enhances KIR gene transcription through direct binding to an upstream distal promoter element.
F. Cichocki, R. J. Hanson, T. Lenvik, M. Pitt, V. McCullar, H. Li, S. K. Anderson, and J. S. Miller (2009)
Blood
113, 3245-3253
|Abstract »|Full Text »|PDF »
Macrophages in Hepatitis B and Hepatitis C Virus Infections.
Evolution and Survival of Marine Carnivores Did Not Require a Diversity of Killer Cell Ig-Like Receptors or Ly49 NK Cell Receptors.
J. A. Hammond, L. A. Guethlein, L. Abi-Rached, A. K. Moesta, and P. Parham (2009)
J. Immunol.
182, 3618-3627
|Abstract »|Full Text »|PDF »
The strength of inhibitory input during education quantitatively tunes the functional responsiveness of individual natural killer cells.
P. Brodin, T. Lakshmikanth, S. Johansson, K. Karre, and P. Hoglund (2009)
Blood
113, 2434-2441
|Abstract »|Full Text »|PDF »
Nucleophosmin Is Cleaved and Inactivated by the Cytotoxic Granule Protease Granzyme M during Natural Killer Cell-mediated Killing.
S. P. Cullen, I. S. Afonina, R. Donadini, A. U. Luthi, J. P. Medema, P. I. Bird, and S. J. Martin (2009)
J. Biol. Chem.
284, 5137-5147
|Abstract »|Full Text »|PDF »
Complete Characterization of Killer Ig-Like Receptor (KIR) Haplotypes in Mauritian Cynomolgus Macaques: Novel Insights into Nonhuman Primate KIR Gene Content and Organization.
B. N. Bimber, A. J. Moreland, R. W. Wiseman, A. L. Hughes, and D. H. O'Connor (2008)
J. Immunol.
181, 6301-6308
|Abstract »|Full Text »|PDF »
Altered natural killer cell subset distributions in resolved and persistent hepatitis C virus infection following single source exposure.
L Golden-Mason, L Madrigal-Estebas, E McGrath, M J Conroy, E J Ryan, J E Hegarty, C O'Farrelly, and D G Doherty (2008)
Gut
57, 1121-1128
|Abstract »|Full Text »|PDF »
Antiviral NK cell responses in HIV infection: I. NK cell receptor genes as determinants of HIV resistance and progression to AIDS.
A. Iannello, O. Debbeche, S. Samarani, and A. Ahmad (2008)
J. Leukoc. Biol.
84, 1-26
|Abstract »|Full Text »|PDF »
Killer Ig-Like Receptor Expression in Uterine NK Cells Is Biased toward Recognition of HLA-C and Alters with Gestational Age.
A. M. Sharkey, L. Gardner, S. Hiby, L. Farrell, R. Apps, L. Masters, J. Goodridge, L. Lathbury, C. A. Stewart, S. Verma, et al. (2008)
J. Immunol.
181, 39-46
|Abstract »|Full Text »|PDF »
Synergistic Polymorphism at Two Positions Distal to the Ligand-Binding Site Makes KIR2DL2 a Stronger Receptor for HLA-C Than KIR2DL3.
A. K. Moesta, P. J. Norman, M. Yawata, N. Yawata, M. Gleimer, and P. Parham (2008)
J. Immunol.
180, 3969-3979
|Abstract »|Full Text »|PDF »
HLA alleles determine differences in human natural killer cell responsiveness and potency.
S. Kim, J. B. Sunwoo, L. Yang, T. Choi, Y.-J. Song, A. R. French, A. Vlahiotis, J. F. Piccirillo, M. Cella, M. Colonna, et al. (2008)
PNAS
105, 3053-3058
|Abstract »|Full Text »|PDF »
Testing Strategy To Identify Cases of Acute Hepatitis C Virus (HCV) Infection and To Project HCV Incidence Rates.
K. Page-Shafer, B. L. Pappalardo, L. H. Tobler, B. H. Phelps, B. R. Edlin, A. R. Moss, T. L. Wright, D. J. Wright, T. R. O'Brien, S. Caglioti, et al. (2008)
J. Clin. Microbiol.
46, 499-506
|Abstract »|Full Text »|PDF »
Differential natural killer cell mediated inhibition of HIV-1 replication based on distinct KIR/HLA subtypes.
G. Alter, M. P. Martin, N. Teigen, W. H. Carr, T. J. Suscovich, A. Schneidewind, H. Streeck, M. Waring, A. Meier, C. Brander, et al. (2007)
J. Exp. Med.
204, 3027-3036
|Abstract »|Full Text »|PDF »
Intrahepatic Lymphocyte Expression of Dipeptidyl Peptidase I-Processed Granzyme B and Perforin Induces Hepatocyte Expression of Serine Proteinase Inhibitor 6 (Serpinb9/SPI-6).
H. W. Stout-Delgado, Y. Getachew, B. C. Miller, and D. L. Thiele (2007)
J. Immunol.
179, 6561-6567
|Abstract »|Full Text »|PDF »
Detection of KIR3DS1 on the Cell Surface of Peripheral Blood NK Cells Facilitates Identification of a Novel Null Allele and Assessment of KIR3DS1 Expression during HIV-1 Infection.
V. Pascal, E. Yamada, M. P. Martin, G. Alter, M. Altfeld, J. A. Metcalf, M. W. Baseler, J. W. Adelsberger, M. Carrington, S. K. Anderson, et al. (2007)
J. Immunol.
179, 1625-1633
|Abstract »|Full Text »|PDF »
KIR2DS1-Positive NK Cells Mediate Alloresponse against the C2 HLA-KIR Ligand Group In Vitro.
J. H. Chewning, C. N. Gudme, K. C. Hsu, A. Selvakumar, and B. Dupont (2007)
J. Immunol.
179, 854-868
|Abstract »|Full Text »|PDF »
Protection from Lethal Infection by Adoptive Transfer of CD8 T Cells Genetically Engineered to Express Virus-Specific Innate Immune Receptor.
K. Iizuka, C. Nakajima, Y.-M. Iizuka, M. Takase, T. Kato, S. Noda, K. Tanaka, and O. Kanagawa (2007)
J. Immunol.
179, 1122-1128
|Abstract »|Full Text »|PDF »
Evolution of Killer Cell Ig-Like Receptor (KIR) Genes: Definition of an Orangutan KIR Haplotype Reveals Expansion of Lineage III KIR Associated with the Emergence of MHC-C.
L. A. Guethlein, A. M. Older Aguilar, L. Abi-Rached, and P. Parham (2007)
J. Immunol.
179, 491-504
|Abstract »|Full Text »|PDF »
Genetic Susceptibility, HIV Infection, and the Kidney.
K. Kiryluk, J. Martino, and A. G. Gharavi (2007)
Clin. J. Am. Soc. Nephrol.
2, S25-S35
|Abstract »|Full Text »|PDF »
S. Ravet, D. Scott-Algara, E. Bonnet, H. K. Tran, T. Tran, N. Nguyen, L. X. Truong, I. Theodorou, F. Barre-Sinoussi, G. Pancino, et al. (2007)
Blood
109, 4296-4305
|Abstract »|Full Text »|PDF »
Differential NKp30 Inducibility in Chimpanzee NK Cells and Conserved NK Cell Phenotype and Function in Long-Term HIV-1-Infected Animals.
E. Rutjens, S. Mazza, R. Biassoni, G. Koopman, L. Radic, M. Fogli, P. Costa, M. C. Mingari, L. Moretta, J. Heeney, et al. (2007)
J. Immunol.
178, 1702-1712
|Abstract »|Full Text »|PDF »
Deficient Major Histocompatibility Complex-Linked Innate Murine Cytomegalovirus Immunity in MA/My.L-H2b Mice and Viral Downregulation of H-2k Class I Proteins.
X. Xie, A. Dighe, P. Clark, P. Sabastian, S. Buss, and M. G. Brown (2007)
J. Virol.
81, 229-236
|Abstract »|Full Text »|PDF »
Cutting Edge: Resistance to HIV-1 Infection among African Female Sex Workers Is Associated with Inhibitory KIR in the Absence of Their HLA Ligands.
W. Jennes, S. Verheyden, C. Demanet, C. A. Adje-Toure, B. Vuylsteke, J. N. Nkengasong, and L. Kestens (2006)
J. Immunol.
177, 6588-6592
|Abstract »|Full Text »|PDF »
A Single Polymorphism Disrupts the Killer Ig-Like Receptor 2DL2/2DL3 D1 Domain.
C. J. VandenBussche, S. Dakshanamurthy, P. E. Posch, and C. K. Hurley (2006)
J. Immunol.
177, 5347-5357
|Abstract »|Full Text »|PDF »
Gender susceptibility to chronic hepatitis C virus infection associated with interleukin 10 promoter polymorphism..
N. Paladino, H. Fainboim, G. Theiler, T. Schroder, A. E. Munoz, A. C. Flores, O. Galdame, and L. Fainboim (2006)
J. Virol.
80, 9144-9150
|Abstract »|Full Text »|PDF »
CCR5 in T Cell-Mediated Liver Diseases: What's Going On?.
M. N. Ajuebor, J. A. Carey, and M. G. Swain (2006)
J. Immunol.
177, 2039-2045
|Abstract »|Full Text »|PDF »
Natural Killer Receptors on CD8 T Cells and Natural Killer Cells from Different HLA-C Phenotypes in Melanoma Patients..
J. A. Campillo, J. A. Martinez-Escribano, M. R. Moya-Quiles, L. A. Marin, M. Muro, N. Guerra, A. Parrado, M. Campos, J. F. Frias, A. Minguela, et al. (2006)
Clin. Cancer Res.
12, 4822-4831
|Abstract »|Full Text »|PDF »
Altered CD45 expression in C77G carriers influences immune function and outcome of hepatitis C infection.
R Dawes, B Hennig, W Irving, S Petrova, S Boxall, V Ward, D Wallace, D C Macallan, M Thursz, A Hill, et al. (2006)
J. Med. Genet.
43, 678-684
|Abstract »|Full Text »|PDF »
Surface expression and cytolytic function of natural killer cell receptors is altered in chronic hepatitis C.
J Nattermann, G Feldmann, G Ahlenstiel, B Langhans, T Sauerbruch, and U Spengler (2006)
Gut
55, 869-877
|Abstract »|Full Text »|PDF »
Apolipoprotein {varepsilon}3 allele is associated with persistent hepatitis C virus infection.
D A Price, M F Bassendine, S M Norris, C Golding, G L Toms, M L Schmid, C M Morris, A D Burt, and P T Donaldson (2006)
Gut
55, 715-718
|Abstract »|Full Text »|PDF »
Cmv4, a New Locus Linked to the NK Cell Gene Complex, Controls Innate Resistance to Cytomegalovirus in Wild-Derived Mice.
S. G. Adam, A. Caraux, N. Fodil-Cornu, J. C. Loredo-Osti, S. Lesjean-Pottier, J. Jaubert, I. Bubic, S. Jonjic, J.-L. Guenet, S. M. Vidal, et al. (2006)
J. Immunol.
176, 5478-5485
|Abstract »|Full Text »|PDF »
Roles for HLA and KIR polymorphisms in natural killer cell repertoire selection and modulation of effector function.
M. Yawata, N. Yawata, M. Draghi, A.-M. Little, F. Partheniou, and P. Parham (2006)
J. Exp. Med.
203, 633-645
|Abstract »|Full Text »|PDF »
Epidemiological and Genetic Correlates of Severe Acute Respiratory Syndrome Coronavirus Infection in the Hospital with the Highest Nosocomial Infection Rate in Taiwan in 2003.
Y.-M. A. Chen, S.-Y. Liang, Y.-P. Shih, C.-Y. Chen, Y.-M. Lee, L. Chang, S.-Y. Jung, M.-S. Ho, K.-Y. Liang, H.-Y. Chen, et al. (2006)
J. Clin. Microbiol.
44, 359-365
|Abstract »|Full Text »|PDF »
Donor KIR genotype has a major influence on the rate of cytomegalovirus reactivation following T-cell replete stem cell transplantation.
M. Cook, D. Briggs, C. Craddock, P. Mahendra, D. Milligan, C. Fegan, P. Darbyshire, S. Lawson, E. Boxall, and P. Moss (2006)
Blood
107, 1230-1232
|Abstract »|Full Text »|PDF »
The Inhibitory Receptor NKG2A Determines Lysis of Vaccinia Virus-Infected Autologous Targets by NK Cells.
C. R. Brooks, T. Elliott, P. Parham, and S. I. Khakoo (2006)
J. Immunol.
176, 1141-1147
|Abstract »|Full Text »|PDF »
Requisite H2k Role in NK Cell-Mediated Resistance in Acute Murine Cytomegalovirus-Infected MA/My Mice.
A. Dighe, M. Rodriguez, P. Sabastian, X. Xie, M. McVoy, and M. G. Brown (2005)
J. Immunol.
175, 6820-6828
|Abstract »|Full Text »|PDF »
Killer Cell Ig-Like Receptor-Dependent Signaling by Ig-Like Transcript 2 (ILT2/CD85j/LILRB1/LIR-1).
Shared Alterations in NK Cell Frequency, Phenotype, and Function in Chronic Human Immunodeficiency Virus and Hepatitis C Virus Infections.
U.-C. Meier, R. E. Owen, E. Taylor, A. Worth, N. Naoumov, C. Willberg, K. Tang, P. Newton, P. Pellegrino, I. Williams, et al. (2005)
J. Virol.
79, 12365-12374
|Abstract »|Full Text »|PDF »
Natural-killer cells and dendritic cells: "l'union fait la force".
T. Walzer, M. Dalod, S. H. Robbins, L. Zitvogel, and E. Vivier (2005)
Blood
106, 2252-2258
|Abstract »|Full Text »|PDF »
Recognition of peptide-MHC class I complexes by activating killer immunoglobulin-like receptors.
C. A. Stewart, F. Laugier-Anfossi, F. Vely, X. Saulquin, J. Riedmuller, A. Tisserant, L. Gauthier, F. Romagne, G. Ferracci, F. A. Arosa, et al. (2005)
PNAS
102, 13224-13229
|Abstract »|Full Text »|PDF »
Multiple Cytokines Regulate the NK Gene Complex-Encoded Receptor Repertoire of Mature NK Cells and T Cells.
F. Gays, K. Martin, R. Kenefeck, J. G. Aust, and C. G. Brooks (2005)
J. Immunol.
175, 2938-2947
|Abstract »|Full Text »|PDF »
Extensive polymorphisms of LILRB1 (ILT2, LIR1) and their association with HLA-DRB1 shared epitope negative rheumatoid arthritis.
K. Kuroki, N. Tsuchiya, M. Shiroishi, L. Rasubala, Y. Yamashita, K. Matsuta, T. Fukazawa, M. Kusaoi, Y. Murakami, M. Takiguchi, et al. (2005)
Hum. Mol. Genet.
14, 2469-2480
|Abstract »|Full Text »|PDF »
HANGING IN THE BALANCE: KIR and Their Role in Disease.
A. P. Williams, A. R. Bateman, and S. I. Khakoo (2005)
Mol. Interv.
5, 226-240
|Abstract »|Full Text »|PDF »
Improved outcome in HLA-identical sibling hematopoietic stem-cell transplantation for acute myelogenous leukemia predicted by KIR and HLA genotypes.
K. C. Hsu, C. A. Keever-Taylor, A. Wilton, C. Pinto, G. Heller, K. Arkun, R. J. O'Reilly, M. M. Horowitz, and B. Dupont (2005)
Blood
105, 4878-4884
|Abstract »|Full Text »|PDF »
Divergence of natural killer cell receptor and related molecule in the decidua from sporadic miscarriage with normal chromosome karyotype.
H. Yamada, S. Shimada, M. Morikawa, K. Iwabuchi, R. Kishi, K. Onoe, and H. Minakami (2005)
Mol. Hum. Reprod.
11, 451-457
|Abstract »|Full Text »|PDF »
Comparison of Killer Ig-Like Receptor Genotyping and Phenotyping for Selection of Allogeneic Blood Stem Cell Donors.
W. Leung, R. Iyengar, B. Triplett, V. Turner, F. G. Behm, M. S. Holladay, J. Houston, and R. Handgretinger (2005)
J. Immunol.
174, 6540-6545
|Abstract »|Full Text »|PDF »
Natural selection drives recurrent formation of activating killer cell immunoglobulin-like receptor and Ly49 from inhibitory homologues.
Hierarchy of resistance to cervical neoplasia mediated by combinations of killer immunoglobulin-like receptor and human leukocyte antigen loci.
M. Carrington, S. Wang, M. P. Martin, X. Gao, M. Schiffman, J. Cheng, R. Herrero, A. C. Rodriguez, R. Kurman, R. Mortel, et al. (2005)
J. Exp. Med.
201, 1069-1075
|Abstract »|Full Text »|PDF »
Natural killer cell education in mice with single or multiple major histocompatibility complex class I molecules.
S. Johansson, M. Johansson, E. Rosmaraki, G. Vahlne, R. Mehr, M. Salmon-Divon, F. Lemonnier, K. Karre, and P. Hoglund (2005)
J. Exp. Med.
201, 1145-1155
|Abstract »|Full Text »|PDF »
In Vitro and In Vivo Characterization of a Novel Antibody-Like Single-Chain TCR Human IgG1 Fusion Protein.
L. A. Mosquera, K. F. Card, S. A. Price-Schiavi, H. J. Belmont, B. Liu, J. Builes, X. Zhu, P.-A. Chavaillaz, H.-i. Lee, J.-a. Jiao, et al. (2005)
J. Immunol.
174, 4381-4388
|Abstract »|Full Text »|PDF »
Two Structurally Related Rat Ly49 Receptors with Opposing Functions (Ly49 Stimulatory Receptor 5 and Ly49 Inhibitory Receptor 5) Recognize Nonclassical MHC Class Ib-Encoded Target Ligands.
C. Naper, K.-Z. Dai, L. Kveberg, B. Rolstad, E. C. Niemi, J. T. Vaage, and J. C. Ryan (2005)
J. Immunol.
174, 2702-2711
|Abstract »|Full Text »|PDF »
Combinations of Maternal KIR and Fetal HLA-C Genes Influence the Risk of Preeclampsia and Reproductive Success.
S. E. Hiby, J. J. Walker, K. M. O'Shaughnessy, C. W.G. Redman, M. Carrington, J. Trowsdale, and A. Moffett (2004)
J. Exp. Med.
200, 957-965
|Abstract »|Full Text »|PDF »
Unlocking the Determinants of HCV Immunity.
(2004)
Journal Watch Infectious Diseases
2004, 8
|Full Text »