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Role of Predicted Metalloprotease Motif of Jab1/Csn5 in Cleavage of Nedd8 from Cul1
Gregory A. Cope,1Greg S. B. Suh,3*L. Aravind,4Sylvia E. Schwarz,1S. Lawrence Zipursky,23Eugene V. Koonin,4Raymond J. Deshaies12
COP9 signalosome (CSN) cleaves the ubiquitin-like protein Nedd8
from the Cul1 subunit of SCF ubiquitin ligases. The Jab1/MPNdomain
metalloenzyme (JAMM) motif in the Jab1/Csn5 subunit wasfound
to underlie CSN's Nedd8 isopeptidase activity. JAMM is foundin
proteins from archaea, bacteria, and eukaryotes, includingthe Rpn11
subunit of the 26S proteasome. Metal chelators and pointmutations within JAMM abolished CSN-dependent cleavage of Nedd8from
Cul1, yet had little effect on CSN complex assembly. OptimalSCF
activity in yeast and both viability and proper photoreceptorcell (R
cell) development in Drosophila melanogaster requiredan
intact Csn5 JAMM domain. We propose that JAMM isopeptidasesplay
important roles in a variety of physiological pathways.
1 Department of Biology, California Institute
of Technology (CalTech), Pasadena, CA 91125, USA.
2 Howard Hughes Medical Institute,
3 Department of Biological Chemistry, The School of
Medicine, University of California at Los Angeles (UCLA), Los Angeles,
CA 90095, USA.
4 National Center for Biotechnology
Information, National Library of Medicine, National Institutes of
Health, Bethesda, MD 20894, USA.
*
Present address: Department of Biology, California Institute of
Technology, Pasadena, CA 91125, USA.
Present address: G2M Cancer Drugs AG, Frankfurt/Main,
Germany.
To whom correspondence should be addressed. E-mail:
deshaies{at}caltech.edu
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281, 17457-17465
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281, 12618-12624
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23, 6798-6808
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J. Biol. Chem.
278, 28882-28891
|Abstract »|Full Text »|PDF »
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T. Gan-Erdene, K. Nagamalleswari, L. Yin, K. Wu, Z.-Q. Pan, and K. D. Wilkinson (2003)
J. Biol. Chem.
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|Abstract »|Full Text »|PDF »
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J. Biol. Chem.
278, 25637-25643
|Abstract »|Full Text »|PDF »
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J. Biol. Chem.
278, 23180-23186
|Abstract »|Full Text »|PDF »
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