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Science 11 December 1998:
Vol. 282. no. 5396, pp. 2082 - 2085
DOI: 10.1126/science.282.5396.2082

Reports

Proofreading and Aminoacylation of tRNAs Before Export from the Nucleus

Elsebet Lund, James E. Dahlberg *

After synthesis and processing in the nucleus, mature transfer RNAs (tRNAs) are exported to the cytoplasm in a Ran·guanosine triphosphate-dependent manner. Export of defective or immature tRNAs is avoided by monitoring both structure and function of tRNAs in the nucleus, and only tRNAs with mature 5' and 3' ends are exported. All tRNAs examined can be aminoacylated in nuclei of Xenopus oocytes, thereby providing a possible mechanism for functional proofreading of newly made tRNAs. Inhibition of aminoacylation of a specific tRNA retards its appearance in the cytoplasm, indicating that nuclear aminoacylation promotes efficient export.

Department of Biomolecular Chemistry, University of Wisconsin-Madison, 1300 University Avenue, Madison, WI 53-706, USA.
*   To whom correspondence should be addressed. E-mail: dahlberg{at}facstaff.wisc.edu


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   Abstract »    Full Text »    PDF »
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   Abstract »    Full Text »
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   Abstract »    Full Text »    PDF »
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   Abstract »    Full Text »    PDF »
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   Abstract »    Full Text »
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   Full Text »
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   Abstract »    Full Text »
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   Abstract »    Full Text »
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   Full Text »    PDF »
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   Abstract »    Full Text »    PDF »
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   Abstract »    Full Text »    PDF »
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   Abstract »    Full Text »    PDF »
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S. Sarkar, A. K. Azad, and A. K. Hopper (1999)
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   Abstract »    Full Text »    PDF »
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M. Ibba and a. D. Söll (1999)
Science 286, 1893-1897
   Abstract »    Full Text »
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D.-H. Kim, G. Edwalds-Gilbert, C. Ren, and R.-J. Lin (1999)
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   Abstract »    Full Text »
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P. A. Frischmeyer and HarryC. Dietz (1999)
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   Abstract »    Full Text »    PDF »
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A. Gersappe, L. Burger, and D. J. Pintel (1999)
J. Biol. Chem. 274, 22452-22458
   Abstract »    Full Text »    PDF »
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C. Magrath and L. E. Hyman (1999)
Genetics 152, 129-141
   Abstract »    Full Text »
A Premature Termination Codon Interferes with the Nuclear Function of an Exon Splicing Enhancer in an Open Reading Frame-Dependent Manner.
A. Gersappe and D. J. Pintel (1999)
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   Abstract »    Full Text »    PDF »
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M. DELHASE and M. KARIN (1999)
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   Abstract »    PDF »
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F. J. Iborra, D. A. Jackson, and P. R. Cook (2001)
Science 293, 1139-1142
   Abstract »    Full Text »    PDF »
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L. Nathanson and M. P. Deutscher (2000)
J. Biol. Chem. 275, 31559-31562
   Abstract »    Full Text »    PDF »
One of Two Genes Encoding Glycyl-tRNA Synthetase in Saccharomyces cerevisiae Provides Mitochondrial and Cytoplasmic Functions.
R. J. Turner, M. Lovato, and P. Schimmel (2000)
J. Biol. Chem. 275, 27681-27688
   Abstract »    Full Text »    PDF »
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K. Deinert, F. Fasiolo, E. C. Hurt, and G. Simos (2001)
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   Abstract »    Full Text »    PDF »
Overlapping Destinations for Two Dual Targeted Glycyl-tRNA Synthetases in Arabidopsis thaliana and Phaseolus vulgaris.
A.-M. Duchene, N. Peeters, A. Dietrich, A. Cosset, I. D. Small, and H. Wintz (2001)
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