Related Content
Search Google Scholar for:
More Information
Related Jobs from ScienceCareers
|
|
Science 20 October 1995: Vol. 270. no. 5235, pp. 484 - 487 DOI: 10.1126/science.270.5235.484
|
|
Reports
Serial Analysis of Gene Expression
Victor E. Velculescu,
Lin Zhang,
Bert Vogelstein,
Kenneth W. Kinzler (1)
The characteristics of an organism are determined by the genes
expressed within it. A method was developed, called serial analysis of
gene expression (SAGE), that allows the quantitative and simultaneous
analysis of a large number of transcripts. To demonstrate this
strategy, short diagnostic sequence tags were isolated from pancreas,
concatenated, and cloned. Manual sequencing of 1000 tags revealed a
gene expression pattern characteristic of pancreatic function. New
pancreatic transcripts corresponding to novel tags were identified.
SAGE should provide a broadly applicable means for the quantitative
cataloging and comparison of expressed genes in a variety of normal,
developmental, and disease states.
V. E. Velculescu and K. W. Kinzler, Oncology Center and the
Program in Human Genetics and Molecular Biology, Johns Hopkins
University, Baltimore, MD 21231, USA.
L. Zhang and B. Vogelstein, Howard Hughes Medical Institute, Johns
Hopkins Oncology Center, Baltimore, MD 21231, USA.
(1) To whom correspondence should be addressed.
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- An overview of recent developments in genomics and associated statistical methods.
- P. J. Bickel, J. B. Brown, H. Huang, and Q. Li (2009)
Phil Trans R Soc A
367, 4313-4337
| Abstract »
| Full Text »
| PDF »
- Male infertility and the involvement of the X chromosome.
- K. Stouffs, H. Tournaye, I. Liebaers, and W. Lissens (2009)
Hum. Reprod. Update
15, 623-637
| Abstract »
| Full Text »
| PDF »
- Expression profiling of Drosophila mitochondrial genes via deep mRNA sequencing.
- T. T. Torres, M. Dolezal, C. Schlotterer, and B. Ottenwalder (2009)
Nucleic Acids Res.
| Abstract »
| Full Text »
| PDF »
- Hepatitis C Virus Core Protein and Cellular Protein HAX-1 Promote 5-Fluorouracil-Mediated Hepatocyte Growth Inhibition.
- A. Banerjee, K. Saito, K. Meyer, S. Banerjee, M. Ait-Goughoulte, R. B. Ray, and R. Ray (2009)
J. Virol.
83, 9663-9671
| Abstract »
| Full Text »
| PDF »
- Transcriptome analysis by strand-specific sequencing of complementary DNA.
- D. Parkhomchuk, T. Borodina, V. Amstislavskiy, M. Banaru, L. Hallen, S. Krobitsch, H. Lehrach, and A. Soldatov (2009)
Nucleic Acids Res.
37, e123
| Abstract »
| Full Text »
| PDF »
- Next-generation tag sequencing for cancer gene expression profiling.
- A. S. Morrissy, R. D. Morin, A. Delaney, T. Zeng, H. McDonald, S. Jones, Y. Zhao, M. Hirst, and M. A. Marra (2009)
Genome Res.
19, 1825-1835
| Abstract »
| Full Text »
| PDF »
- Global Analysis of Gene Expression Profiles in Brassica napus Developing Seeds Reveals a Conserved Lipid Metabolism Regulation with Arabidopsis thaliana.
- Y. Niu, G.-Z. Wu, R. Ye, W.-H. Lin, Q.-M. Shi, L.-J. Xue, X.-D. Xu, Y. Li, Y.-G. Du, and H.-W. Xue (2009)
Mol Plant
2, 1107-1122
| Abstract »
| Full Text »
| PDF »
- Expansion Mechanisms and Functional Annotations of Hypothetical Genes in the Rice Genome.
- S.-Y. Jiang, A. Christoffels, R. Ramamoorthy, and S. Ramachandran (2009)
Plant Physiology
150, 1997-2008
| Abstract »
| Full Text »
| PDF »
- Integrating shotgun proteomics and mRNA expression data to improve protein identification.
- S. R. Ramakrishnan, C. Vogel, J. T. Prince, R. Wang, Z. Li, L. O. Penalva, M. Myers, E. M. Marcotte, and D. P. Miranker (2009)
Bioinformatics
25, 1397-1403
| Abstract »
| Full Text »
| PDF »
- Differential Gene Expression in Vertebrate Embryos.
- I. B. Dawid (2009)
J. Biol. Chem.
284, 13277-13283
| Full Text »
| PDF »
- Morphological quality and nucleic acid preservation in cytopathology.
- A Gazziero, V Guzzardo, E Aldighieri, and A Fassina (2009)
J. Clin. Pathol.
62, 429-434
| Abstract »
| Full Text »
| PDF »
- Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses.
- M. J. Fullwood, C.-L. Wei, E. T. Liu, and Y. Ruan (2009)
Genome Res.
19, 521-532
| Abstract »
| Full Text »
| PDF »
- Massively parallel sequencing of the polyadenylated transcriptome of C. elegans.
- L. W. Hillier, V. Reinke, P. Green, M. Hirst, M. A. Marra, and R. H. Waterston (2009)
Genome Res.
19, 657-666
| Abstract »
| Full Text »
| PDF »
- Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line.
- Q. Zhao, O. L. Caballero, S. Levy, B. J. Stevenson, C. Iseli, S. J. de Souza, P. A. Galante, D. Busam, M. A. Leversha, K. Chadalavada, et al. (2009)
PNAS
106, 1886-1891
| Abstract »
| Full Text »
| PDF »
- Functional Analysis of MmeI from Methanol Utilizer Methylophilus methylotrophus, a Subtype IIC Restriction-Modification Enzyme Related to Type I Enzymes.
- J. Nakonieczna, T. Kaczorowski, A. Obarska-Kosinska, and J. M. Bujnicki (2009)
Appl. Envir. Microbiol.
75, 212-223
| Abstract »
| Full Text »
| PDF »
- MicroRNAs Differentially Expressed in ACTH-Secreting Pituitary Tumors.
- F. C. Amaral, N. Torres, F. Saggioro, L. Neder, H. R. Machado, W. A. Silva Jr, A. C. Moreira, and M. Castro (2009)
J. Clin. Endocrinol. Metab.
94, 320-323
| Abstract »
| Full Text »
| PDF »
- GermSAGE: a comprehensive SAGE database for transcript discovery on male germ cell development.
- T.-L. Lee, H.-H. Cheung, J. Claus, C. Sastry, S. Singh, L. Vu, O. Rennert, and W.-Y. Chan (2009)
Nucleic Acids Res.
37, D891-D897
| Abstract »
| Full Text »
| PDF »
- CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens.
- L. G. Almeida, N. J. Sakabe, A. R. deOliveira, M. C. C. Silva, A. S. Mundstein, T. Cohen, Y.-T. Chen, R. Chua, S. Gurung, S. Gnjatic, et al. (2009)
Nucleic Acids Res.
37, D816-D819
| Abstract »
| Full Text »
| PDF »
- CleanEx: new data extraction and merging tools based on MeSH term annotation.
- V. Praz and P. Bucher (2009)
Nucleic Acids Res.
37, D880-D884
| Abstract »
| Full Text »
| PDF »
- Integrated microfluidic bioprocessor for single-cell gene expression analysis.
- N. M. Toriello, E. S. Douglas, N. Thaitrong, S. C. Hsiao, M. B. Francis, C. R. Bertozzi, and R. A. Mathies (2008)
PNAS
105, 20173-20178
| Abstract »
| Full Text »
| PDF »
- Confirmation of Gene Expression-Based Prediction of Survival in Non-Small Cell Lung Cancer.
- N. L. Guo, Y.-W. Wan, K. Tosun, H. Lin, Z. Msiska, D. C. Flynn, S. C. Remick, V. Vallyathan, A. Dowlati, X. Shi, et al. (2008)
Clin. Cancer Res.
14, 8213-8220
| Abstract »
| Full Text »
| PDF »
- Human neural crest cells display molecular and phenotypic hallmarks of stem cells.
- S. Thomas, M. Thomas, P. Wincker, C. Babarit, P. Xu, M. C. Speer, A. Munnich, S. Lyonnet, M. Vekemans, and H. C. Etchevers (2008)
Hum. Mol. Genet.
17, 3411-3425
| Abstract »
| Full Text »
| PDF »
- Keeping Up With the Next Generation: Massively Parallel Sequencing in Clinical Diagnostics.
- J. R. ten Bosch and W. W. Grody (2008)
J. Mol. Diagn.
10, 484-492
| Abstract »
| Full Text »
| PDF »
- BRCA1 5083del19 Mutant Allele Selectively Up-Regulates Periostin Expression In vitro and In vivo.
- B. Quaresima, F. Romeo, M. C. Faniello, M. Di Sanzo, C.-G. Liu, A. Lavecchia, C. Taccioli, E. Gaudio, F. Baudi, F. Trapasso, et al. (2008)
Clin. Cancer Res.
14, 6797-6803
| Abstract »
| Full Text »
| PDF »
- Serial analysis of mutation spectra (SAMS): a new approach for the determination of mutation spectra of site-specific DNA damage and their sequence dependence.
- H. Fang and J.-S. Taylor (2008)
Nucleic Acids Res.
36, 6004-6012
| Abstract »
| Full Text »
| PDF »
- Core Signaling Pathways in Human Pancreatic Cancers Revealed by Global Genomic Analyses.
- S. Jones, X. Zhang, D. W. Parsons, J. C.-H. Lin, R. J. Leary, P. Angenendt, P. Mankoo, H. Carter, H. Kamiyama, A. Jimeno, et al. (2008)
Science
321, 1801-1806
| Abstract »
| Full Text »
| PDF »
- An Integrated Genomic Analysis of Human Glioblastoma Multiforme.
- D. W. Parsons, S. Jones, X. Zhang, J. C.-H. Lin, R. J. Leary, P. Angenendt, P. Mankoo, H. Carter, I-M. Siu, G. L. Gallia, et al. (2008)
Science
321, 1807-1812
| Abstract »
| Full Text »
| PDF »
- Cell type-specific DNA methylation patterns in the human breast.
- N. Bloushtain-Qimron, J. Yao, E. L. Snyder, M. Shipitsin, L. L. Campbell, S. A. Mani, M. Hu, H. Chen, V. Ustyansky, J. E. Antosiewicz, et al. (2008)
PNAS
105, 14076-14081
| Abstract »
| Full Text »
| PDF »
- A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome.
- M. Sultan, M. H. Schulz, H. Richard, A. Magen, A. Klingenhoff, M. Scherf, M. Seifert, T. Borodina, A. Soldatov, D. Parkhomchuk, et al. (2008)
Science
321, 956-960
| Abstract »
| Full Text »
| PDF »
- Sequence-specific reconstruction from fragmentary databases using seed sequences: implementation and validation on SAGE, proteome and generic sequencing data.
- T. J. P. Sobreira and A. Gruber (2008)
Bioinformatics
24, 1676-1680
| Abstract »
| Full Text »
| PDF »
- Four-color DNA sequencing with 3'-O-modified nucleotide reversible terminators and chemically cleavable fluorescent dideoxynucleotides.
- J. Guo, N. Xu, Z. Li, S. Zhang, J. Wu, D. H. Kim, M. Sano Marma, Q. Meng, H. Cao, X. Li, et al. (2008)
PNAS
105, 9145-9150
| Abstract »
| Full Text »
| PDF »
- Serial analysis of the vascular endothelial transcriptome under static and shear stress conditions.
- T. J. Chu and D. G. Peters (2008)
Physiol Genomics
34, 185-192
| Abstract »
| Full Text »
| PDF »
- In Vitro Screening for Regulated Transcription Factors with Differential Display of DNA-Binding Proteins (DDDP).
- H. Reinke and U. Schibler (2008)
CSH Protocols
2008, pdb.prot5028
| Abstract »
| Full Text »
- Regulation of Glycan Structures in Animal Tissues: TRANSCRIPT PROFILING OF GLYCAN-RELATED GENES.
- A. V. Nairn, W. S. York, K. Harris, E. M. Hall, J. M. Pierce, and K. W. Moremen (2008)
J. Biol. Chem.
283, 17298-17313
| Abstract »
| Full Text »
| PDF »
- Assessment of gene expression in many samples using vertical arrays.
- R. A. Risques, G. Rondeau, M. Judex, M. McClelland, and J. Welsh (2008)
Nucleic Acids Res.
36, e60
| Abstract »
| Full Text »
| PDF »
- Beyond tissueInfo: functional prediction using tissue expression profile similarity searches.
- D. Aguilar, L. Skrabanek, S. S. Gross, B. Oliva, and F. Campagne (2008)
Nucleic Acids Res.
36, 3728-3737
| Abstract »
| Full Text »
| PDF »
- Fine Expression Profiling of Full-length Transcripts using a Size-unbiased cDNA Library Prepared with the Vector-capping Method.
- M. Oshikawa, Y. Sugai, R. Usami, K. Ohtoko, S. Toyama, and S. Kato (2008)
DNA Res
15, 123-136
| Abstract »
| Full Text »
| PDF »
- The Fidelity Index provides a systematic quantitation of star activity of DNA restriction endonucleases.
- H. Wei, C. Therrien, A. Blanchard, S. Guan, and Z. Zhu (2008)
Nucleic Acids Res.
36, e50
| Abstract »
| Full Text »
| PDF »
- Serial Analysis of Gene Expression Identifies Connective Tissue Growth Factor Expression as a Prognostic Biomarker in Gallbladder Cancer.
- H. Alvarez, A. Corvalan, J. C. Roa, P. Argani, F. Murillo, J. Edwards, R. Beaty, G. Feldmann, S.-M. Hong, M. Mullendore, et al. (2008)
Clin. Cancer Res.
14, 2631-2638
| Abstract »
| Full Text »
| PDF »
- Comparative analysis of oocyte transcript profiles reveals a high degree of conservation among species.
- M. Vallee, K. Aiba, Y. Piao, M.-F. Palin, M. S H Ko, and M.-A. Sirard (2008)
Reproduction
135, 439-448
| Abstract »
| Full Text »
| PDF »
- Small-sample estimation of negative binomial dispersion, with applications to SAGE data.
- M. D. Robinson and G. K. Smyth (2008)
Biostat.
9, 321-332
| Abstract »
| Full Text »
| PDF »
- Quantitative gene expression profiling of mouse brain regions reveals differential transcripts conserved in human and affected in disease models.
- C. Brochier, M.-C. Gaillard, E. Diguet, N. Caudy, C. Dossat, B. Segurens, P. Wincker, E. Roze, J. Caboche, P. Hantraye, et al. (2008)
Physiol Genomics
33, 170-179
| Abstract »
| Full Text »
| PDF »
- A simple ligation-based method to increase the information density in sequencing reactions used to deconvolute nucleic acid selections.
- J. L. Childs-Disney and M. D. Disney (2008)
RNA
14, 390-394
| Abstract »
| Full Text »
| PDF »
- Differentiation of the bovine dominant follicle from the cohort upregulates mRNA expression for new tissue development genes.
- M Mihm, P J Baker, L M Fleming, A M Monteiro, and P J O'Shaughnessy (2008)
Reproduction
135, 253-265
| Abstract »
| Full Text »
| PDF »
- Differential display of DNA-binding proteins reveals heat-shock factor 1 as a circadian transcription factor.
- H. Reinke, C. Saini, F. Fleury-Olela, C. Dibner, I. J. Benjamin, and U. Schibler (2008)
Genes & Dev.
22, 331-345
| Abstract »
| Full Text »
| PDF »
- Genomics of mRNA turnover.
- J. E. Perez-Ortin (2008)
Brief Funct Genomic Proteomic
| Abstract »
| Full Text »
| PDF »
- The UCSC Genome Browser Database: 2008 update.
- D. Karolchik, R. M. Kuhn, R. Baertsch, G. P. Barber, H. Clawson, M. Diekhans, B. Giardine, R. A. Harte, A. S. Hinrichs, F. Hsu, et al. (2008)
Nucleic Acids Res.
36, D773-D779
| Abstract »
| Full Text »
| PDF »
- Hepatic Stellate Cells: Protean, Multifunctional, and Enigmatic Cells of the Liver.
- S. L. Friedman (2008)
Physiol Rev
88, 125-172
| Abstract »
| Full Text »
| PDF »
- Coexpression of neuronatin splice forms promotes medulloblastoma growth.
- I-M. Siu, R. Bai, G. L. Gallia, J. B. Edwards, B. M. Tyler, C. G. Eberhart, and G. J. Riggins (2008)
Neuro-oncol
10, 716-724
| Abstract »
| Full Text »
| PDF »
- Identification of Matrix Metalloproteinase 11 as a Predictive Tumor Marker in Serum Based on Gene Expression Profiling.
- Y.-H. Yang, H. Deng, W.-M. Li, Q.-Y. Zhang, X.-T. Hu, B. Xiao, H.-H. Zhu, P.-L. Geng, and Y.-Y. Lu (2008)
Clin. Cancer Res.
14, 74-81
| Abstract »
| Full Text »
| PDF »
- Gene expression profiling by massively parallel sequencing.
- T. T. Torres, M. Metta, B. Ottenwalder, and C. Schlotterer (2008)
Genome Res.
18, 172-177
| Abstract »
| Full Text »
| PDF »
- Dicarbonyl/L-Xylulose Reductase: A Potential Biomarker Identified by Laser-Capture Microdissection-Micro Serial Analysis of Gene Expression of Human Prostate Adenocarcinoma.
- J. H. Cho-Vega, S. Tsavachidis, K.-A. Do, J. Nakagawa, L. J. Medeiros, and T. J. McDonnell (2007)
Cancer Epidemiol. Biomarkers Prev.
16, 2615-2622
| Abstract »
| Full Text »
| PDF »
- CtIP Silencing as a Novel Mechanism of Tamoxifen Resistance in Breast Cancer.
- M. Wu, D. R. Soler, M. C. Abba, M. I. Nunez, R. Baer, C. Hatzis, A. Llombart-Cussac, A. Llombart-Bosch, and C. M. Aldaz (2007)
Mol. Cancer Res.
5, 1285-1295
| Abstract »
| Full Text »
| PDF »
- Comparison between the Gene Expression Profile of Human Muller Cells and Two Spontaneous Muller Cell Lines.
- C. B. Lupien, C. Bolduc, S. Landreville, and C. Salesse (2007)
Invest. Ophthalmol. Vis. Sci.
48, 5229-5242
| Abstract »
| Full Text »
| PDF »
- Moderated statistical tests for assessing differences in tag abundance.
- M. D. Robinson and G. K. Smyth (2007)
Bioinformatics
23, 2881-2887
| Abstract »
| Full Text »
| PDF »
- Human Transcriptome Subtraction by Using Short Sequence Tags To Search for Tumor Viruses in Conjunctival Carcinoma.
- H. Feng, J. L. Taylor, P. V. Benos, R. Newton, K. Waddell, S. B. Lucas, Y. Chang, and P. S. Moore (2007)
J. Virol.
81, 11332-11340
| Abstract »
| Full Text »
| PDF »
- Building comparative gene expression databases for the mouse preimplantation embryo using a pipeline approach to UniGene.
- J.-A.L. Stanton, A.B. Macgregor, C. Mason, M. Dameh, and D.P.L. Green (2007)
Mol. Hum. Reprod.
13, 713-720
| Abstract »
| Full Text »
| PDF »
- Identification and analysis of internal promoters in Caenorhabditis elegans operons.
- P. Huang, E. D. Pleasance, J. S. Maydan, R. Hunt-Newbury, N. J. O'Neil, A. Mah, D. L. Baillie, M. A. Marra, D. G. Moerman, and S. J.M. Jones (2007)
Genome Res.
17, 1478-1485
| Abstract »
| Full Text »
| PDF »
- Transcriptome annotation using tandem SAGE tags.
- E. Rivals, A. Boureux, M. Lejeune, F. Ottones, O. Pecharroman Perez, J. Tarhio, F. Pierrat, F. Ruffle, T. Commes, and J. Marti (2007)
Nucleic Acids Res.
35, e108
| Abstract »
| Full Text »
| PDF »
- SAGETTARIUS: a program to reduce the number of tags mapped to multiple transcripts and to plan SAGE sequencing stages.
- L. Bianchetti, Y. Wu, E. Guerin, F. Plewniak, and O. Poch (2007)
Nucleic Acids Res.
35, e122
| Abstract »
| Full Text »
| PDF »
- Molecular Profiling of Matched Samples Identifies Biomarkers of Papillary Thyroid Carcinoma Lymph Node Metastasis.
- J. M. Cerutti, G. Oler, P. Michaluart Jr., R. Delcelo, R. M. Beaty, J. Shoemaker, and G. J. Riggins (2007)
Cancer Res.
67, 7885-7892
| Abstract »
| Full Text »
| PDF »
- Gender difference of androgen actions on skeletal muscle transcriptome.
- M. Yoshioka, A. Boivin, C. Bolduc, and J. St-Amand (2007)
J. Mol. Endocrinol.
39, 119-133
| Abstract »
| Full Text »
| PDF »
- Serial Analysis of rRNA Genes and the Unexpected Dominance of Rare Members of Microbial Communities.
- M. N. Ashby, J. Rine, E. F. Mongodin, K. E. Nelson, and D. Dimster-Denk (2007)
Appl. Envir. Microbiol.
73, 4532-4542
| Abstract »
| Full Text »
| PDF »
- iGentifier: indexing and large-scale profiling of unknown transcriptomes.
- A. Fischer, A. Lenhard, H. Tronecker, Y. Lorat, M. Kraenzle, O. Sorgenfrei, T. Zeppenfeld, M. Haushalter, G. Vogt, U. Gruene, et al. (2007)
Nucleic Acids Res.
35, 4640-4648
| Abstract »
| Full Text »
| PDF »
- High-Throughput, High-Sensitivity Analysis of Gene Expression in Arabidopsis.
- R. M. Kris, S. Felder, M. Deyholos, G. M. Lambert, J. Hinton, I. Botros, R. Martel, B. Seligmann, and D. W. Galbraith (2007)
Plant Physiology
144, 1256-1266
| Abstract »
| Full Text »
| PDF »
- Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs).
- Y. Ruan, H. S. Ooi, S. W. Choo, K. P. Chiu, X. D. Zhao, K.G. Srinivasan, F. Yao, C. Y. Choo, J. Liu, P. Ariyaratne, et al. (2007)
Genome Res.
17, 828-838
| Abstract »
| Full Text »
| PDF »
- HS1-Associated Protein X-1 Regulates Carcinoma Cell Migration and Invasion via Clathrin-Mediated Endocytosis of Integrin {alpha}v{beta}6.
- A. G. Ramsay, M. D. Keppler, M. Jazayeri, G. J. Thomas, M. Parsons, S. Violette, P. Weinreb, I. R. Hart, and J. F. Marshall (2007)
Cancer Res.
67, 5275-5284
| Abstract »
| Full Text »
| PDF »
- Quantitating tissue specificity of human genes to facilitate biomarker discovery.
- G. Vasmatzis, E. W. Klee, D. M. Kube, T. M. Therneau, and F. Kosari (2007)
Bioinformatics
23, 1348-1355
| Abstract »
| Full Text »
| PDF »
- Transcriptional Interferences in cis Natural Antisense Transcripts of Humans and Mice.
- N. Osato, Y. Suzuki, K. Ikeo, and T. Gojobori (2007)
Genetics
176, 1299-1306
| Abstract »
| Full Text »
| PDF »
- MPSS profiling of embryonic gonad and primordial germ cells in chicken.
- H. Kim, T. S. Park, W. K. Lee, S. Moon, J. N. Kim, J. H. Shin, J. G. Jung, S. D. Lee, S. H. Park, K. J. Park, et al. (2007)
Physiol Genomics
29, 253-259
| Abstract »
| Full Text »
| PDF »
- Evaluation of Matrix Metalloproteinase 7 in Plasma and Pancreatic Juice as a Biomarker for Pancreatic Cancer.
- K. F.D. Kuhlmann, J.W. O. van Till, M. A. Boermeester, P. R. de Reuver, I. D. Tzvetanova, G. J. A. Offerhaus, F. J.W. ten Kate, O. R.C. Busch, T. M. van Gulik, D. J. Gouma, et al. (2007)
Cancer Epidemiol. Biomarkers Prev.
16, 886-891
| Abstract »
| Full Text »
| PDF »
- Interpreting physiological responses to environmental change through gene expression profiling.
- A. Y. Gracey (2007)
J. Exp. Biol.
210, 1584-1592
| Abstract »
| Full Text »
| PDF »
- Sampling the Arabidopsis Transcriptome with Massively Parallel Pyrosequencing.
- A. P.M. Weber, K. L. Weber, K. Carr, C. Wilkerson, and J. B. Ohlrogge (2007)
Plant Physiology
144, 32-42
| Abstract »
| Full Text »
| PDF »
- Magnaporthe grisea Infection Triggers RNA Variation and Antisense Transcript Expression in Rice.
- M. Gowda, R.-C. Venu, H. Li, C. Jantasuriyarat, S. Chen, M. Bellizzi, V. Pampanwar, H. Kim, R. A. Dean, E. Stahlberg, et al. (2007)
Plant Physiology
144, 524-533
| Abstract »
| Full Text »
| PDF »
- Gene Expression Profile in Temporal Lobe Epilepsy.
- E. Aronica and J. A. Gorter (2007)
Neuroscientist
13, 100-108
| Abstract »
| PDF »
- Cigarette Smoke Stimulates Matrix Metalloproteinase-2 Activity via EGR-1 in Human Lung Fibroblasts.
- W. Ning, Y. Dong, J. Sun, C. Li, M. A. Matthay, C. A. Feghali-Bostwick, and A. M. K. Choi (2007)
Am. J. Respir. Cell Mol. Biol.
36, 480-490
| Abstract »
| Full Text »
| PDF »
- Automatic correspondence of tags and genes (ACTG): a tool for the analysis of SAGE, MPSS and SBS data.
- P. A. F. Galante, J. Trimarchi, C. L. Cepko, S. J. de Souza, L. Ohno-Machado, and W. P. Kuo (2007)
Bioinformatics
23, 903-905
| Abstract »
| Full Text »
| PDF »
- A Comprehensive Proteomics and Genomics Analysis Reveals Novel Transmembrane Proteins in Human Platelets and Mouse Megakaryocytes Including G6b-B, a Novel Immunoreceptor Tyrosine-based Inhibitory Motif Protein.
- Y. A. Senis, M. G. Tomlinson, A. Garcia, S. Dumon, V. L. Heath, J. Herbert, S. P. Cobbold, J. C. Spalton, S. Ayman, R. Antrobus, et al. (2007)
Mol. Cell. Proteomics
6, 548-564
| Abstract »
| Full Text »
| PDF »
- Large-scale identification of novel transcripts in the human genome.
- B. A. Peters, B. St. Croix, T. Sjoblom, J. M. Cummins, N. Silliman, J. Ptak, S. Saha, K. W. Kinzler, C. Hatzis, and V. E. Velculescu (2007)
Genome Res.
17, 287-292
| Abstract »
| Full Text »
| PDF »
- Exploring host-pathogen interactions at the epithelial surface: application of transcriptomics in lung biology.
- J. B. Vos, N. A. Datson, K. F. Rabe, and P. S. Hiemstra (2007)
Am J Physiol Lung Cell Mol Physiol
292, L367-L377
| Abstract »
| Full Text »
| PDF »
|
|