Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.


Science 24 December 1993:
Vol. 262. no. 5142, pp. 2030 - 2033
DOI: 10.1126/science.8266098

Articles

Science, Vol 262, Issue 5142, 2030-2033
Copyright © 1993 by American Association for the Advancement of Science


articles

A covalent enzyme-substrate intermediate with saccharide distortion in a mutant T4 lysozyme

R Kuroki, LH Weaver, and BW Matthews

Institute of Molecular Biology, Howard Hughes Medical Institute, University of Oregon, Eugene 97403.

The glycosyl-enzyme intermediate in lysozyme action has long been considered to be an oxocarbonium ion, although precedent from other glycosidases and theoretical considerations suggest it should be a covalent enzyme-substrate adduct. The mutation of threonine 26 to glutamic acid in the active site cleft of phage T4 lysozyme (T4L) produced an enzyme that cleaved the cell wall of Escherichia coli but left the product covalently bound to the enzyme. The crystalline complex was nonisomorphous with wild-type T4L, and analysis of its structure showed a covalent linkage between the product and the newly introduced glutamic acid 26. The covalently linked sugar ring was substantially distorted, suggesting that distortion of the substrate toward the transition state is important for catalysis, as originally proposed by Phillips. It is also postulated that the adduct formed by the mutant is an intermediate, consistent with a double displacement mechanism of action in which the glycosidic linkage is cleaved with retention of configuration as originally proposed by Koshland. The peptide part of the cell wall fragment displays extensive hydrogen-bonding interactions with the carboxyl-terminal domain of the enzyme, consistent with previous studies of mutations in T4L.


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Trehalulose Synthase Native and Carbohydrate Complexed Structures Provide Insights into Sucrose Isomerization.
S. Ravaud, X. Robert, H. Watzlawick, R. Haser, R. Mattes, and N. Aghajari (2007)
J. Biol. Chem. 282, 28126-28136
   Abstract »    Full Text »    PDF »
Structure of Escherichia coli Lytic Transglycosylase MltA with Bound Chitohexaose: IMPLICATIONS FOR PEPTIDOGLYCAN BINDING AND CLEAVAGE.
K. E. van Straaten, T. R. M. Barends, B. W. Dijkstra, and A.-M. W. H. Thunnissen (2007)
J. Biol. Chem. 282, 21197-21205
   Abstract »    Full Text »    PDF »
Experimental verification of the crucial roles of glu73 in the catalytic activity and structural stability of goose type lysozyme..
S. Kawamura, K. Ohno, M. Ohkuma, Y. Chijiiwa, and T. Torikata (2006)
J. Biochem. 140, 75-85
   Abstract »    Full Text »    PDF »
Disulfide Isomerization After Membrane Release of Its SAR Domain Activates P1 Lysozyme.
M. Xu, A. Arulandu, D. K. Struck, S. Swanson, J. C. Sacchettini, and R. Young (2005)
Science 307, 113-117
   Abstract »    Full Text »    PDF »
Helicobacter pylori Expresses an Autolytic Enzyme: Gene Identification, Cloning, and Theoretical Protein Structure.
E. Marsich, P. Zuccato, S. Rizzi, A. Vetere, E. Tonin, and S. Paoletti (2002)
J. Bacteriol. 184, 6270-6279
   Abstract »    Full Text »    PDF »
Roles of catalytic residues in {alpha}-amylases as evidenced by the structures of the product-complexed mutants of a maltotetraose-forming amylase.
K. Hasegawa, M. Kubota, and Y. Matsuura (1999)
Protein Eng. Des. Sel. 12, 819-824
   Abstract »    Full Text »    PDF »
Structural basis of the conversion of T4 lysozyme into a transglycosidase by reengineering the active site.
R. Kuroki, L. H. Weaver, and B. W. Matthews (1999)
PNAS 96, 8949-8954
   Abstract »    Full Text »    PDF »
A glycosidase antibody elicited against a chair-like transition state analog by in vitro immunization.
J. Yu, S. Y. Choi, K.-D. Moon, H.-H. Chung, H. J. Youn, S. Jeong, H. Park, and P. G. Schultz (1998)
PNAS 95, 2880-2884
   Abstract »    Full Text »    PDF »
A Covalent Enzyme-Substrate Adduct in a Mutant Hen Egg White Lysozyme (D52E).
R. Kuroki, Y. Ito, Y. Kato, and T. Imoto (1997)
J. Biol. Chem. 272, 19976-19981
   Abstract »    Full Text »    PDF »
Crystallographic Studies of the Interaction of Cyclodextrin Glycosyltransferase from Bacillus circulans Strain 251 with Natural Substrates and Products.
R. M. A. Knegtel, B. Strokopytov, D. Penninga, O. G. Faber, H.ėt. J. Rozeboom, K. H. Kalk, L. Dijkhuizen, and B. W. Dijkstra (1995)
J. Biol. Chem. 270, 29256-29264
   Abstract »    Full Text »    PDF »



To Advertise     Find Products


Science. ISSN 0036-8075 (print), 1095-9203 (online)