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Science 31 August 2001:
Vol. 293. no. 5535, pp. 1657 - 1662
DOI: 10.1126/science.1062246


Abstract
Full Text
Allosteric Activation of a Spring-Loaded Natriuretic Peptide Receptor Dimer by Hormone
Xiao-lin He, Dar-chone Chow, Monika M. Martick, and K. Christopher Garcia

Supplementary Material

Supplemental Figure 1. Electron density of the NPR-C structures, and the bound CNP hormone. (A) SIGMAA-weighted omit map (2Fo-Fc) of a portion of the dimer interface between the NH2-terminal domains of the NPR-C complex at 2.0 Å resolution. (B) SIGMAA-weighted omit map of the N-linked glycan at Asparagine-248 on the unliganded NPR-C at 2.9 Å. (C) SIGMAA-weighted omit map of the single bound CNP peptide conformation in two orientations at 2.0 Å from the side (left) and two "end-on" views looking from the top down (top) and the bottom up (bottom). The twofold symmetry of the peptide electron density is clear in all three views, as is the identical unique conformation of the peptide in both orientations.


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Supplemental Figure 2. Comparison of NPR-A and NPR-C dimers. (A) A crystal packing diagram [with the program O (40)] of the unliganded rat NPR-A structure is shown indicating the "tail-to-tail" dimer initially chosen to accommodate a 2:2 stoichiometry. However, the physiologically-relevant NPR-A dimer consistent with a 1:2 stoichiometry is in the same crystal lattice and is identical to that seen in human NPR-C. (B) The physiologically relevant dimer of NPR-A is aligned by the membrane-proximal domains to NPR-C, showing the identical topology. As for unliganded NPR-C, hormone binding to this NPR-A dimer will require closing of the interdimer gap.


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Supplemental Table 1. Site I and Site II contact surfaces (top) and hydrogen bonds (bottom) in the NPR-C/CNP interfaces. Buried surface area was calculated with a 1.4 Å probe radius.
Site I (Total buried surface 1346 Å2)
Site II (Total buried surface 1018 Å2)
CNPNeighboring NPR-C (I) residues (<4.5 Å)Neighboring NPR-C ( II) residues (<4.5 Å)
Gly5I188
Cys6Y159*, I188
Phe7Y159*, Y169dag, L172dag, E173*, H176, I188
Gly8H176
Leu9H176, E177, Q180
Lys10K163
Leu11Y169dagK163
Asp12G118*, H121, Y126*
Arg13R100*, E125N65, Y93*, K163
Ile14Y93*, R166*, Y169dag, F170*
Gly15Y93*Y93*
Ser16Y93*, A96*, R100*
Met17Y93*A96*, P97, R100*, G118*, F119*, Y126*
Ser18K163
Gly19E173*
Leu20Y169*
Gly21Y169*
Cys22
*conserved across NPR family. dagsimilar hydrophobic or aromatic residues.
Hydrogen bonds between NPR-C and CNP in site I and site II of the complex
Site I atoms
Site II atoms
NPR-C ( I )CNPDistance (Å)NPR-C ( II )CNPDistance (Å)
E125 Oepsilon1R13 Neta23.1R100* Neta1Ser 16 O3.2
E125 Oepsilon2R13 Neta12.7Y169# OHGly21 O3.0
H176 Nepsilon2G 8 N3.1E173* Oepsilon2Leu 20 N3.1
* conserved across NPR family.





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