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Science 18 July 1997: Vol. 277. no. 5324, pp. 387 - 390 DOI: 10.1126/science.277.5324.387
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Technical Comments
Genetic Complexity and Parkinson's Disease
Mihael H. Polymeropoulos et al. describe the
genetic linkage of a large Parkinson's disease (PD) pedigree to
chromosome 4q21-q23 (1). In this study, which affirms a long
hypothesized genetic component to the disease, linkage was detected in
a single large family with the use of an autosomal dominant model with
99% penetrance of the disease trait. The clinical presentation in this
family, however, may differ from typical idiopathic PD because of the apparent autosomal dominant transmisson, early onset, rapid course, and
less frequent occurrence of tremor as a significant sign
(2). Thus, it is unclear whether the putative PD locus
identified by Polymeropoulos et al. (which they termed PD1)
is responsible for the majority of familial idiopathic PD cases.
As part of an ongoing multicenter study of the genetics of idiopathic
PD, we have ascertained 94 Caucasian families (a total of 213 affected
relatives sampled: 108 affected sibpairs and 31 affected relative
pairs) with at least two individuals in each family meeting clinical
criteria for idiopathic PD (3). We have identified
approximately 200 multiplex idiopathic PD families to ascertain for a
genomic screen. The 94 families discussed here were those completely
ascertained, with DNA sampled, at the time of the analysis. Linkage
analysis of chromosome 4q21-q23 markers in these idiopathic PD families
did not reveal evidence for linkage of an autosomal dominant, highly
penetrant gene, as was described by Polymeropoulos et al.
(1, 4). We determined two-point log odds (lod) scores,
with the use of the model of Polymeropoulos et al. as well
as a low penetrance "affecteds-only" autosomal dominant model.
These lod scores were strongly negative for markers D4S2361,
D4S2409, D4S2380, D4S1647, and D4S2623. Multipoint
analysis of the genetic map
D4S2361-17cM-D4S1647-10.5cM-D4S2623
supported these findings for both models, excluding the entire
candidate region. We found no evidence for heterogeneity of either the
two-point (P > 0.20) or multipoint (ln likelihood = 1) lod
scores (5). Because the power of the parametric lod score
method suffers when the genetic model is misspecified, we also used
nonparametric analyses of affected relative pairs (6). As
with the parametric lod score analysis, we found no significant
evidence for linkage using either two-point or multipoint analysis; in
this data set, the multipoint location scores (MLS) exclude the entire
27.5 cM region for recurrence risks to siblings as low as 2.5 (Fig. 1). Because the pedigree analyzed by Polymeropoulos et al.
contained many younger onset cases (mean age at onset of the
disease was 46), we repeated our analysis in the 22 families with at
least one affected individual with an onset earlier than age 45; the analysis in the subset supported the results from the full
sample (7).
Fig. 1.
Multipoint exclusion map for chromosome 4q21-q23
markers. The multipoint lod scores (MLS) within the region are all less than 2.0 at s = 2.5, excluding the entire candidate
region identified by Polymeropoulos et al. (1).
Arrows indicate chromosome markers.
[View Larger Version of this Image (18K GIF file)]
The absence of linkage to chromosome 4q21-q23 in our dataset indicates
that there is genetic heterogeneity in PD. It is possible that the
region identified by Polymeropoulos et al. harbors a disease
locus responsible only for a rare autosomal dominant form of PD. Such a
situation would be analogous to the genetics of Alzheimer's disease
(AD), where mutations (in the amyloid precursor protein and the
presenilin 1 and presenilin 2 genes) that cause autosomal dominant AD
are responsible for less than 2% of all cases (8).
Therefore, although the report by Polymeropoulos et al. is a
first step in unraveling the genetic etiology of PD, other independent
genetic effects likely remain to be
discovered.
William K. Scott Jeffrey M. Stajich Larry H. Yamaoka Marcy C. Speer Jeffery M. Vance Allen D. Roses Margaret A. Pericak-Vance the Deane Laboratory Parkinson
Disease Research Group (9)
Department of
Medicine, Duke University Medical Center, Durham, NC, 27710, USA;
E-mail: mpv{at}locus.mc.duke.edu
REFERENCES AND NOTES
-
M. H. Polymeropoulos
et al.,
Science
274,
1197
(1996)
[Abstract/Full Text].
-
L. I. Golbe,
G. Di Iorio,
V. Bonavita,
D. C. Miller,
R. C. Duvoisin,
Ann. Neurol.
27,
276
(1990)
[Medline].
-
The families enrolled in this study were ascertained in the
following manner. Each of the principal investigators of the 12 study
sites identified idiopathic PD patients with one or more first-degree
relatives with PD. All 94 families included in the analysis were
responsive to levodopa. Specifically excluded were patients with a
history of encephalitis, neuroleptic therapy within the year before
diagnosis, evidence of normal pressure hydrocephalus, or a clinical
course with atypical features, suggesting secondary Parkinsonism. All
first-degree relatives of these patients who consented to participate
in this study were subsequently examined and queried regarding the
above exclusion criteria and atypical clinical features. Each of these
individuals was assigned a status based on their history and the number
of the following clinical signs that were present: resting tremor,
bradykinesia, and rigidity. Individuals were coded as "affected" if
their examination demonstrated at least two of the signs and had no
other etiologies for parkinsonism or atypical clinical features,
"unclear" if they had only one sign but may have had a history of
atypical clinical features, and "at risk" if they had no signs.
Mean age at onset of PD symptoms in affected individuals was 61.4 years
(SD, 13.1 years). Mean age at examination in affected individuals was
71.5 years (SD, 10.2 years) and in unclear or at risk individuals was
68.4 years (SD, 14.5 years).
-
Microsatellite markers spanning the region defined by
Polymeropoulos et al. (1) were selected for the
analysis; the resulting genetic map was:
D4S2361-7.7cM-D4S2409-5.3cM-D4S2380-4cM-D4S1647-10.5cM-D4S2623
(Cooperative Human Linkage Center, database is online at http://www.chlc.org).
Two-point and multipoint lod scores were calculated with the use of the
VITESSE software package [J. R. O'Connell and
D. E. Weeks,
Nature Genet.
11,
402
(1995)
[Medline]], we assumed, as
did Polymeropoulos et al., autosomal dominant inheritance,
a disease allele frequency of 0.001, and 99% penetrance. A low
penetrance, "affecteds only" analysis was also performed. Allele
frequencies were estimated from 75 unrelated Caucasian controls.
-
Heterogeneity analysis of two-point and multipoint lod scores
was performed using the admixture test, implemented in the HOMOG
software package [J. Ott, Analysis of Human Genetic
Linkage, revised ed. (Johns Hopkins Press, Baltimore, MD,
1991)]. The asymptotic chi-square test is not valid for multipoint
lod scores; therefore, a log likelihood comparison is used to assess
heterogeneity.
-
Two-point affected-relative-pair analysis was performed using
the SimIBD software package [
S. Davis,
M. Schroeder,
L. R. Goldin,
D.
E. Weeks,
Am. J. Hum. Genet.
58,
867
(1996)
[Medline]].
Multipoint affected sibpair exclusion mapping was performed with the
use of ASPEX [available from N. Risch, Stanford University,
and based on
N. Risch,
Am. J. Hum. Genet.
46,
229
(1990)
[Medline]] with the use of all five microsatellite markers. Estimates of
the recurrence risk to siblings (
s) range
from 3 to 150, with the majority of studies supporting a
s between 10 and 20 [
R. C. Duvoisin,
Adv. Neurol.
60,
306
(1993)
[Medline]; K. Kondo and K. Watanabe,
ibid., p. 346]. Exclusion mapping with the recurrence risk
set at the low end of this range determined that the region can be
excluded for s 2.5.
-
W. K. Scott et al., unpublished data.
-
M. A. Pericak-Vance and
J. L. Haines,
Trends Genet.
11,
504
(1995)
[Medline];
A. D. Roses,
Annu. Rev. Med.
47,
387
(1996)
[Abstract/Full Text].
-
The Deane Laboratory Parkinson's Disease Research Group is a
multicenter study of the genetics of idiopathic Parkinson
Disease coordinated by the Center for Human Genetics, Duke University
Medical Center. The collaborating sites and principal investigators
are: University of Minnesota, M. Nance; Ohio State University, J. Hubble; University of Kansas Medical Center, W. Koller; University of
Pennsylvania Graduate Neurological Center, M. B. Stern and A. Colcher;
Emory University School of Medicine, R. L. Watts; Rush
Presbyterian-St. Luke's Hospital, C. Goetz and E. Pappert; Carolina
Neurological Clinic, F. H. Allen Jr.; Baylor College of Medicine, J. Jankovic and W. Ondo; Marshfield Clinic, B. C. Hiner; University of
California, San Francisco, M. Aminoff and G. Dowling; University of
California, Los Angeles, G. W. Small.
-
Supported by funds from the Deane Laboratory and grant NS23660
from NINDS.
26 February 1997; revised 31 March 1997; accepted 19 June
1997
Polymeropoulos et al. present results of a
genome-wide screen for genetic linkage in a large family with
autosomal-dominantly inherited L-Dopa-responsive
parkinsonism with Lewy-body pathology (1). They convincingly
demonstrate linkage with polymorphic markers on chromosome 4q21-4q23,
with a maximum two-point lod score of 6.00 for marker
D4S2380. The locus was termed PD1. The role of the PD1 locus
in other families with inherited parkinsonism and in sporadic PD
remains to be investigated.
We have examined polymorphic markers closely linked to PD1 in 13 multigenerational families with inherited parkinsonism (Table 1).
Affected members in all families exhibited at least two of the three
cardinal clinical signs of PD (akinesia, rigidity, and resting tremor),
as well as asymmetry at onset and a marked improvement on
L-Dopa treatment. Rigorous exclusion criteria were applied (supranuclear ophthalmoplegia, cerebellar or pyramidal signs, and
severe autonomic or postural disturbance within 2 years of onset). The
wide range of age at onset and spectrum of clinical features, including
the presence of dementia in addition to parkinsonism in some affected
individuals, was similar to that observed in the family studied by
Polymeropoulos et al. (1). No additional neurologic deficit was observed except for amyotrophy in one affected of family A. Multipoint analysis with eight polymorphic markers spanning the region from GATA 10G07 to D4S2623
excluded the entire 17 cM region likely to contain PD1 in five of the
families (families A, B, C, D, and IT-1). In one additional family (G),
the major portion of the critical region was also excluded, with lod
scores between 1.9 and 2 for the remainder of the interval (Fig.
1). Data from one (previously unpublished) family of
southern Bavarian origin showed positive lod scores with a maximum
multipoint score of 1.5 (family K, Fig. 1). This lod score is close to
the theoretical maximum in this relatively small family.
Table 1.
Demographic and clinical characteristics in 13 families with inherited
parkinsonism.
|
Family |
Number of affected
relatives |
Affected relatives examined |
Age at
onset* (years) |
L-Dopa response |
Atypical
features |
Refer- ence |
|
| 1 |
A |
12 |
4 |
51
(35 to 60) |
Positive |
Amyotrophy and
dementia in
some |
(2, 3) |
| 2 |
B |
8 |
4 |
62
(51 to 82) |
Positive |
Dementia in
some |
(2, 3) |
| 3 |
C |
11 |
4 |
60 (55 to
66) |
Positive |
None |
(2, 3) |
| 4 |
D |
18 |
5 |
63
(48 to
78) |
Positive |
None |
(3, 4) |
| 5 |
G |
11 |
4 |
56
(48 to 74) |
Positive |
Dementia in
some |
(3) |
| 6 |
IT-1 |
5 |
4 |
54 (36 to
89) |
Positive |
None |
(5) |
| 7 |
K |
4 |
4 |
45
(37 to
63) |
Positive |
None |
- |
| 8 |
FR-041 |
3 |
3 |
63 (60
to 65) |
Positive |
None |
- |
| 9 |
FR-722 |
8 |
5 |
59
(53 to
64) |
Positive |
None |
(6) |
| 10 |
FR-727 |
4 |
3 |
41
(31 to
52) |
Positive |
None |
- |
| 11 |
FR-755 |
4 |
3 |
38 (29
to 52) |
Positive |
None |
- |
| 12 |
UK-A |
14 |
5 |
53
(42 to
70) |
Positive |
None |
- |
| 13 |
UK-B |
5 |
5 |
37 (31
to 41) |
Positive |
None |
(7) |
|
|
*
Mean and range.
|
Unpublished (-).
|
|
Fig. 1.
Multipoint linkage analysis of the
PD1-region on chromosome 4q21-q23 in seven families with familial
parkinsonism. Polymorphic DNA fragments were amplified by PCR with the
use of published primer sequences and a standard protocol. Multipoint
analysis was performed using GENEHUNTER (8), and two-point
analysis was done using VITESSE (9). An autosomal dominant
model with an age-dependent penetrance was assumed. As was done by
Polymeropoulos et al. (1), unaffected
individuals were set to be unaffected only when they were older than
the mean age of onset in the respective families; all other unaffected
individuals were treated as unknown. Frequency of the disease allele
was set to 0.001. Marker allele frequencies were set to be equal for
all alleles. Estimating marker allele frequencies from founders in the
pedigrees did not alter multipoint lod scores
significantly.
[View Larger Version of this Image (31K GIF file)]
In six families (FR-041, FR-722, FR-727, FR-755, UK-A, and UK-B), only
the two polymorphic markers most closely linked to PD1
(D4S1647 and D4S2380) have been analysed.
Obligate recombinations (no allele shared by all affecteds) were
observed in five of these families either for each of the markers
individually (three families), or for the haplotype of both markers
(two families), again strongly arguing against linkage with the PD1
locus. In one family (FR-041), a positive pairwise lod score was
obtained for D4S2380 (0.29 at Theta = 0). Positive lod
scores in families K and FR-041 may reflect true linkage, but they may
also be a result of random fluctuations, because the relatively small
size of these families precludes definite proof of linkage.
We conclude that mutations at the PD1 locus are probably a rare cause
of autosomal-dominant parkinsonism. The role of the PD-1 gene in
sporadic PD is still to be determined.
T. Gasser
Department of Neurology, Klinikum Großhadern, 81377 Munich,
Germany
B. Müller-Myhsok
Bernhard-Nocht-Institute
for Tropical Medicine, Hamburg 20359, Germany
Z. K. Wszolek
Section of Neurology, University of Nebraska, Omaha, NE
68198-2045, USA
A. Dürr
INSERM U289, Paris
75013, France
J. R. Vaughan
Institute of Neurology, The
National Hospital Queen Square, London WC1N 3BG, UK
V. Bonifati G. Meco
Dipartimento di Scienze Neurologiche,
Università "La Sapienza," Rome 00142, Italy
B. Bereznai
Department of Neurology, Klinikum Großhadern
R. Oehlmann
Bernhard-Nocht-Institute for Tropical Medicine
Y. Agid A. Brice
INSERUM U289
N. Wood
Institute of Neurology, The National Hospital Queen Square,
and the European Consortium on Genetic Susceptibility in
Parkinson's Disease (GSPD) (10)
REFERENCES AND NOTES
-
M. H. Polymeropoulos
et al.,
Science
274,
1197
(1996)
[Abstract/Full Text].
-
Z. K. Wszolek,
et al.,
Nervenarzt
64,
331
(1993)
[Medline].
-
M. A. Denson and Z. K. Wszolek, Parkinsonism Related
Disord. 1, 35 (1995).
-
Z. K. Wszolek
et al.,
Neurology
45,
502
(1995)
[Abstract].
-
V. Bonifati et al., Mov. Disord.
11 (suppl. 1), 86 (1996), abstract.
-
P. Mazzetti
et al.,
J. Neurol. Neurosurg. Psychiatry
57,
871
(1994)
[Medline].
-
G. V. Sawle
et al.,
Ann. Neurol.
32,
609
(1992)
[Medline].
-
L. Kruglyak
et al.,
Am. J. Hum. Genet.
68,
1347
(1996)
.
-
J. R. O'Connell and
D. E. Weeks,
Nature Genet.
11,
402
(1995)
[Medline].
-
European Consortium on Genetic Susceptibility in
Parkinson's disease: N. Wood and J. R. Vaughan, The National
Hospital for Neurology and Neurosurgery, London, UK; A. Brice, A. Dürr, J. Tassin, Y. Agid, Institut National de la
Santé et de la Recherche Médicale (INSERM U289),
Paris, France, on behalf of the French Parkinson's Disease Genetics
Network; M. Martinez, INSERM U358, and J. Feingold, INSERM U155, Paris,
France; M. Breteler and B. Oostra, Erasmus University, Rotterdam, The
Netherlands; V. Bonifati, E. Fabrizio, G. Meco, Università "La
Sapienza," Rome, Italy; G. De Michele and G. Campanella, Universita
Federico II, Naples, Italy.
30 December 1996; accepted 19 June
1997
Response: Scott et al. and Gasser
et al. are discussing genetic studies of families with PD
that are designed to examine whether a locus that we previously
reported (1) on chromosome 4q21-q23 is operating in their
sample. The results of Scott et al. in 94 Caucasian families
do not demonstrate linkage even when the 22 families with earlier onset
are examined separately. Similarly, Gasser et al. exclude
linkage in 13 multigenerational families with Parkinson's disease,
with the exception of one family for which they achieved a maximum
multipoint lod score of 1.5 for genetic markers in the 4q21-q23 region.
Cumulatively, these comments suggest that the chromosome 4 locus will
not account for the majority of familial Parkinson's disease and will
be expected to operate only in a small percentage of families with the
illness.
We have recently demonstrated that a mutation in the alpha synuclein
gene is responsible for the phenotype in four families with early onset
Parkinson's disease (2). Because the mutation was not
detected in 50 individuals with sporadic PD, or in two other families
with late onset of the illness, we concluded that mutations in the
alpha synuclein gene will not account for the majority of the genetic
factors of PD, but rather for a proportion of those families with an
early onset autosomal dominant form of the illness. These results are
in agreement with the observation of Scott et al. and Gasser
et al., and suggest that the understanding of genetic
complexity of Parkinson's disease is just beginning to take shape.
Mihael H. Polymeropoulos
Laboratory of Genetic Disease Research, National Human Genome
Research Institute, National Institutes of Health, Bethesda, MD
20892, USA E-mail:mhp{at}aeolus.nhgri.nih.gov
REFERENCES
-
M. H. Polymeropoulos et al., Science 274, 1197 (1996).
-
___,
ibid.
276,
2045
(1997).
30 June 1997; accepted 1 July
1997
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