Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.
CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes
Rodolphe Barrangou,1Christophe Fremaux,2Hélène Deveau,3Melissa Richards,1Patrick Boyaval,2Sylvain Moineau,3Dennis A. Romero,1Philippe Horvath2*
Clustered regularly interspaced short palindromic repeats (CRISPR)are a distinctive feature of the genomes of most Bacteria andArchaea and are thought to be involved in resistance to bacteriophages.We found that, after viral challenge, bacteria integrated newspacers derived from phage genomic sequences. Removal or additionof particular spacers modified the phage-resistance phenotypeof the cell. Thus, CRISPR, together with associated cas genes,provided resistance against phages, and resistance specificityis determined by spacer-phage sequence similarity.
1 Danisco USA Inc., 3329 Agriculture Drive, Madison, WI 53716, USA. 2 Danisco France SAS, Boîte Postale 10, F-86220 Dangé-Saint-Romain, France. 3 Département de Biochimie et de Microbiologie, Faculté des Sciences et de Génie, Groupe de Recherche en Ecologie Buccale, Faculté de Médecine Dentaire, Félix d'Hérelle Reference Center for Bacterial Viruses, Université Laval, G1K 7P4 Québec, Canada.
* To whom correspondence should be addressed. E-mail: philippe.horvath{at}danisco.com
The editors suggest the following Related Resources on Science sites:
In Science Magazine
NEWS OF THE WEEK
Jean Marx (23 March 2007) Science315 (5819), 1650a.
[DOI: 10.1126/science.315.5819.1650a] |Summary »|Full Text »|PDF »
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth.
D. Chivian, E. L. Brodie, E. J. Alm, D. E. Culley, P. S. Dehal, T. Z. DeSantis, T. M. Gihring, A. Lapidus, L.-H. Lin, S. R. Lowry, et al. (2008)
Science
322, 275-278
|Abstract »|Full Text »|PDF »
Characterization of Streptococcus gordonii prophage PH15: complete genome sequence and functional analysis of phage-encoded integrase and endolysin.
Small CRISPR RNAs Guide Antiviral Defense in Prokaryotes.
S. J. J. Brouns, M. M. Jore, M. Lundgren, E. R. Westra, R. J. H. Slijkhuis, A. P. L. Snijders, M. J. Dickman, K. S. Makarova, E. V. Koonin, and J. van der Oost (2008)
Science
321, 960-964
|Abstract »|Full Text »|PDF »
Unraveling Microbial Interactions in Food Fermentations: from Classical to Genomics Approaches.
S. Sieuwerts, F. A. M. de Bok, J. Hugenholtz, and J. E. T. van Hylckama Vlieg (2008)
Appl. Envir. Microbiol.
74, 4997-5007
|Full Text »|PDF »
Insights into Plant Cell Wall Degradation from the Genome Sequence of the Soil Bacterium Cellvibrio japonicus.
R. T. DeBoy, E. F. Mongodin, D. E. Fouts, L. E. Tailford, H. Khouri, J. B. Emerson, Y. Mohamoud, K. Watkins, B. Henrissat, H. J. Gilbert, et al. (2008)
J. Bacteriol.
190, 5455-5463
|Abstract »|Full Text »|PDF »
A Novel Family of Sequence-specific Endoribonucleases Associated with the Clustered Regularly Interspaced Short Palindromic Repeats.
N. Beloglazova, G. Brown, M. D. Zimmerman, M. Proudfoot, K. S. Makarova, M. Kudritska, S. Kochinyan, S. Wang, M. Chruszcz, W. Minor, et al. (2008)
J. Biol. Chem.
283, 20361-20371
|Abstract »|Full Text »|PDF »
Chromosomal Toxin-Antitoxin Systems May Act as Antiaddiction Modules.
M. Saavedra De Bast, N. Mine, and L. Van Melderen (2008)
J. Bacteriol.
190, 4603-4609
|Abstract »|Full Text »|PDF »
CRISPRcompar: a website to compare clustered regularly interspaced short palindromic repeats.
I. Grissa, G. Vergnaud, and C. Pourcel (2008)
Nucleic Acids Res.
36, W145-W148
|Abstract »|Full Text »|PDF »
Systematic Survey for Novel Types of Prokaryotic Retroelements Based on Gene Neighborhood and Protein Architecture.
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis.
T. P. Stinear, T. Seemann, P. F. Harrison, G. A. Jenkin, J. K. Davies, P. D.R. Johnson, Z. Abdellah, C. Arrowsmith, T. Chillingworth, C. Churcher, et al. (2008)
Genome Res.
18, 729-741
|Abstract »|Full Text »|PDF »
Genome Sequence of Thermofilum pendens Reveals an Exceptional Loss of Biosynthetic Pathways without Genome Reduction.
I. Anderson, J. Rodriguez, D. Susanti, I. Porat, C. Reich, L. E. Ulrich, J. G. Elkins, K. Mavromatis, A. Lykidis, E. Kim, et al. (2008)
J. Bacteriol.
190, 2957-2965
|Abstract »|Full Text »|PDF »
"Candidatus Cloacamonas Acidaminovorans": Genome Sequence Reconstruction Provides a First Glimpse of a New Bacterial Division.
E. Pelletier, A. Kreimeyer, S. Bocs, Z. Rouy, G. Gyapay, R. Chouari, D. Riviere, A. Ganesan, P. Daegelen, A. Sghir, et al. (2008)
J. Bacteriol.
190, 2572-2579
|Abstract »|Full Text »|PDF »
Phage Response to CRISPR-Encoded Resistance in Streptococcus thermophilus.
H. Deveau, R. Barrangou, J. E. Garneau, J. Labonte, C. Fremaux, P. Boyaval, D. A. Romero, P. Horvath, and S. Moineau (2008)
J. Bacteriol.
190, 1390-1400
|Abstract »|Full Text »|PDF »
Diversity, Activity, and Evolution of CRISPR Loci in Streptococcus thermophilus.
P. Horvath, D. A. Romero, A.-C. Coute-Monvoisin, M. Richards, H. Deveau, S. Moineau, P. Boyaval, C. Fremaux, and R. Barrangou (2008)
J. Bacteriol.
190, 1401-1412
|Abstract »|Full Text »|PDF »
A bacterial metapopulation adapts locally to phage predation despite global dispersal.
V. Kunin, S. He, F. Warnecke, S. B. Peterson, H. Garcia Martin, M. Haynes, N. Ivanova, L. L. Blackall, M. Breitbart, F. Rohwer, et al. (2008)
Genome Res.
18, 293-297
|Abstract »|Full Text »|PDF »
Genome Sequence of Lactobacillus helveticus, an Organism Distinguished by Selective Gene Loss and Insertion Sequence Element Expansion.
M. Callanan, P. Kaleta, J. O'Callaghan, O. O'Sullivan, K. Jordan, O. McAuliffe, A. Sangrador-Vegas, L. Slattery, G. F. Fitzgerald, T. Beresford, et al. (2008)
J. Bacteriol.
190, 727-735
|Abstract »|Full Text »|PDF »
Structure of the Acidianus Filamentous Virus 3 and Comparative Genomics of Related Archaeal Lipothrixviruses.
G. Vestergaard, R. Aramayo, T. Basta, M. Haring, X. Peng, K. Brugger, L. Chen, R. Rachel, N. Boisset, R. A. Garrett, et al. (2008)
J. Virol.
82, 371-381
|Abstract »|Full Text »|PDF »
RISCy Business: MicroRNAs, Pathogenesis, and Viruses.
B. Berkhout and K.-T. Jeang (2007)
J. Biol. Chem.
282, 26641-26645
|Full Text »|PDF »
Genomics of Actinobacteria: Tracing the Evolutionary History of an Ancient Phylum.
M. Ventura, C. Canchaya, A. Tauch, G. Chandra, G. F. Fitzgerald, K. F. Chater, and D. van Sinderen (2007)
Microbiol. Mol. Biol. Rev.
71, 495-548
|Abstract »|Full Text »|PDF »
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats.
I. Grissa, G. Vergnaud, and C. Pourcel (2007)
Nucleic Acids Res.
35, W52-W57
|Abstract »|Full Text »|PDF »