Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.


Science 2 March 2001:
Vol. 291. no. 5509, pp. 1786 - 1789
DOI: 10.1126/science.1056346

Reports

Molecular and Morphological Supertrees for Eutherian (Placental) Mammals

Fu-Guo Robert Liu,1 Michael M. Miyamoto,1* Nicole P. Freire,1 Phong Q. Ong,1 Michele R. Tennant,2 Timothy S. Young,1 Kikumi F. Gugel1

A large body of diverse comparative data now exists for a major phylogenetic synthesis of the higher-level relationships among eutherian (placental) mammals. We present such a phylogenetic synthesis using the composite trees or supertrees from the combined and separate analyses of their published molecular and morphological source phylogenies. Our combined and separate supertrees largely support the same suprafamilial taxa and orders, but different interordinal clades. These similarities and differences reinforce the continuing contributions of morphological studies, while highlighting the growing influence of molecular information on the field. As current summaries of past research, our supertrees emphasize opportunities for future work, while providing a step toward the eventual integration of the data and characters themselves.

1 Department of Zoology, Box 118525, University of Florida, Gainesville, FL 32611-8525, USA.
2 Health Science Center Libraries, Box 100206, University of Florida, Gainesville, FL 32610-0206, USA.
*   To whom correspondence should be addressed. E-mail: miyamoto{at}zoo.ufl.edu


Read the Full Text



THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Molecular and Genomic Data Identify the Closest Living Relative of Primates.
J. E. Janecka, W. Miller, T. H. Pringle, F. Wiens, A. Zitzmann, K. M. Helgen, M. S. Springer, and W. J. Murphy (2007)
Science 318, 792-794
   Abstract »    Full Text »    PDF »
Ecological correlates of extra-group paternity in mammals.
K. Isvaran and T. Clutton-Brock (2007)
Proc R Soc B 274, 219-224
   Abstract »    Full Text »    PDF »
Supertree Bootstrapping Methods for Assessing Phylogenetic Variation among Genes in Genome-Scale Data Sets.
J. G. Burleigh, A. C. Driskell, and M. J. Sanderson (2006)
Syst Biol 55, 426-440
   Abstract »    Full Text »    PDF »
Tracing the origin and co-phylogeny of the caliciviruses..
G. J. Etherington, S. M. Ring, M. A. Charleston, J. Dicks, V. J. Rayward-Smith, and I. N. Roberts (2006)
J. Gen. Virol. 87, 1229-1235
   Abstract »    Full Text »    PDF »
Getting to the Roots of Matrix Representation.
O. R. P. Bininda-Emonds, R. M. D. Beck, and A. Purvis (2005)
Syst Biol 54, 668-672
   Full Text »    PDF »
The Shape of Supertrees to Come: Tree Shape Related Properties of Fourteen Supertree Methods.
M. Wilkinson, J. A. Cotton, C. Creevey, O. Eulenstein, S. R. Harris, F.-J. Lapointe, C. Levasseur, J. O. Mcinerney, D. Pisani, and J. L. Thorley (2005)
Syst Biol 54, 419-431
   Abstract »    Full Text »    PDF »
Sperm competition and the evolution of male reproductive anatomy in rodents.
S. A Ramm, G. A Parker, and P. Stockley (2005)
Proc R Soc B 272, 949-955
   Abstract »    Full Text »    PDF »
Performance of Flip Supertree Construction with a Heuristic Algorithm.
O. Eulenstein, D. Chen, J. G. Burleigh, D. Fernandez-Baca, and M. J. Sanderson (2004)
Syst Biol 53, 299-308
   Abstract »    Full Text »    PDF »
Obtaining Maximal Concatenated Phylogenetic Data Sets from Large Sequence Databases.
M. J. Sanderson, A. C. Driskell, R. H. Ree, O. Eulenstein, and S. Langley (2003)
Mol. Biol. Evol. 20, 1036-1042
   Abstract »    Full Text »    PDF »
Reciprocal chromosome painting among human, aardvark, and elephant (superorder Afrotheria) reveals the likely eutherian ancestral karyotype.
F. Yang, E. Z. Alkalaeva, P. L. Perelman, A. T. Pardini, W. R. Harrison, P. C. M. O'Brien, B. Fu, A. S. Graphodatsky, M. A. Ferguson-Smith, and T. J. Robinson (2003)
PNAS 100, 1062-1066
   Abstract »    Full Text »    PDF »
Sequence Gaps Join Mice and Men: Phylogenetic Evidence from Deletions in Two Proteins.
C. Poux, T. van Rheede, O. Madsen, and W. W. de Jong (2002)
Mol. Biol. Evol. 19, 2035-2037
   Full Text »    PDF »
A Phylogenomic Approach to Bacterial Phylogeny: Evidence of a Core of Genes Sharing a Common History.
V. Daubin, M. Gouy, and G. Perriere (2002)
Genome Res. 12, 1080-1090
   Abstract »    Full Text »    PDF »
Planetary Biology--Paleontological, Geological, and Molecular Histories of Life.
S. A. Benner, M. D. Caraco, J. M. Thomson, and E. A. Gaucher (2002)
Science 296, 864-868
   Abstract »    Full Text »    PDF »
Resolution of the Early Placental Mammal Radiation Using Bayesian Phylogenetics.
W. J. Murphy, E. Eizirik, S. J. O'Brien, O. Madsen, M. Scally, C. J. Douady, E. Teeling, O. A. Ryder, M. J. Stanhope, W. W. de Jong, et al. (2001)
Science 294, 2348-2351
   Abstract »    Full Text »    PDF »
A likelihood ratio test for evolutionary rate shifts and functional divergence among proteins.
B. Knudsen and M. M. Miyamoto (2001)
PNAS 98, 14512-14517
   Abstract »    Full Text »    PDF »
BIVALVE SYSTEMATICS DURING THE 20TH CENTURY.
(2001)
Journal of Paleontology 75, 1119-1127
EARLY MAMMALIAN RADIATIONS.
(2001)
Journal of Paleontology 75, 1214-1226
Using Phylogenies to Study Convergence: The Case of the Ant-Eating Mammals.
K. Z. Reiss (2001)
Integr. Comp. Biol. 41, 507-525
   Abstract »    Full Text »    PDF »
Microbat paraphyly and the convergent evolution of a key innovation in Old World rhinolophoid microbats.
E. C. Teeling, O. Madsen, R. A. Van Den Bussche, W. W. de Jong, M. J. Stanhope, and M. S. Springer (2002)
PNAS 99, 1431-1436
   Abstract »    Full Text »    PDF »



To Advertise     Find Products


Science. ISSN 0036-8075 (print), 1095-9203 (online)