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Science 28 August 2009:
Vol. 325. no. 5944, pp. 1128 - 1131
DOI: 10.1126/science.1176950

Reports

Functional Characterization of the Antibiotic Resistance Reservoir in the Human Microflora

Morten O. A. Sommer,*,{dagger} Gautam Dantas,*,{dagger},{ddagger} George M. Church

To understand the process by which antibiotic resistance genes are acquired by human pathogens, we functionally characterized the resistance reservoir in the microbial flora of healthy individuals. Most of the resistance genes we identified using culture-independent sampling have not been previously identified and are evolutionarily distant from known resistance genes. By contrast, nearly half of the resistance genes we identified in cultured aerobic gut isolates (a small subset of the gut microbiome) are identical to resistance genes harbored by major pathogens. The immense diversity of resistance genes in the human microbiome could contribute to future emergence of antibiotic resistance in human pathogens.

Department of Genetics, Harvard Medical School, Boston, MA 02115, USA.

* These authors contributed equally to this work.

{ddagger} Present address: Department of Pathology and Immunology, Center for Genome Sciences, Washington University, St. Louis, MO 63108, USA.

{dagger} To whom correspondence should be addressed. E-mail: sommer{at}genetics.med.harvard.edu (M.O.A.S.); dantas{at}wustl.edu (G.D.)

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Are Human Microflora Influenced by Environmental Exposure to Antibiotics?
Peter Oelschlaeger, et al.
Science Online, 13 Oct 2009 [Full text]



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