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Science 14 March 2008:
Vol. 319. no. 5869, pp. 1539 - 1543
DOI: 10.1126/science.1151153

Reports

Using Engineered Scaffold Interactions to Reshape MAP Kinase Pathway Signaling Dynamics

Caleb J. Bashor,1,2 Noah C. Helman,1 Shude Yan,1 Wendell A. Lim1*

Scaffold proteins link signaling molecules into linear pathways by physically assembling them into complexes. Scaffolds may also have a higher-order role as signal-processing hubs, serving as the target of feedback loops that optimize signaling amplitude and timing. We demonstrate that the Ste5 scaffold protein can be used as a platform to systematically reshape output of the yeast mating MAP kinase pathway. We constructed synthetic positive- and negative-feedback loops by dynamically regulating recruitment of pathway modulators to an artificial binding site on Ste5. These engineered circuits yielded diverse behaviors: ultrasensitive dose response, accelerated or delayed response times, and tunable adaptation. Protein scaffolds provide a flexible platform for reprogramming cellular responses and could be exploited to engineer cells with novel therapeutic and biotechnological functions.

1 Department of Cellular and Molecular Pharmacology, University of California at San Francisco, 600 16th Street, San Francisco, CA 94158, USA.
2 Graduate Group in Biophysics, University of California at San Francisco, 600 16th Street, San Francisco, CA 94158, USA.

* To whom correspondence should be addressed. E-mail: lim{at}cmp.ucsf.edu

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THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
A genetic timer through noise-induced stabilization of an unstable state.
M. Turcotte, J. Garcia-Ojalvo, and G. M. Suel (2008)
PNAS 105, 15732-15737
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Science. ISSN 0036-8075 (print), 1095-9203 (online)