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RIG-I-Mediated Antiviral Responses to Single-Stranded RNA Bearing 5'-Phosphates
Andreas Pichlmair,1Oliver Schulz,1Choon Ping Tan,1Tanja I. Näslund,2Peter Liljeström,2Friedemann Weber,3Caetano Reis e Sousa1*
Double-stranded RNA (dsRNA) produced during viral replicationis believed to be the critical trigger for activation of antiviralimmunity mediated by the RNA helicase enzymes retinoic acidinduciblegene I (RIG-I) and melanoma differentiationassociatedgene 5 (MDA5). We showed that influenza A virus infection doesnot generate dsRNA and that RIG-I is activated by viral genomicsingle-stranded RNA (ssRNA) bearing 5'-phosphates. This is blockedby the influenza protein nonstructured protein 1 (NS1), whichis found in a complex with RIG-I in infected cells. These resultsidentify RIG-I as a ssRNA sensor and potential target of viralimmune evasion and suggest that its ability to sense 5'-phosphorylatedRNA evolved in the innate immune system as a means of discriminatingbetween self and nonself.
1 Immunobiology Laboratory, Cancer Research UK, London Research Institute, London WC2A 3PX, UK. 2 Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm 17177, Sweden. 3 Department of Virology, University of Freiburg, Freiburg 79104, Germany.
* To whom correspondence should be addressed. E-mail: caetano{at}cancer.org.uk
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|Abstract »|Full Text »|PDF »
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|Abstract »|Full Text »|PDF »
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282, 32208-32221
|Abstract »|Full Text »|PDF »
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J. Seago, L. Hilton, E. Reid, V. Doceul, J. Jeyatheesan, K. Moganeradj, J. McCauley, B. Charleston, and S. Goodbourn (2007)
J. Gen. Virol.
88, 3002-3006
|Abstract »|Full Text »|PDF »
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C. R. Baskin, H. Bielefeldt-Ohmann, A. Garcia-Sastre, T. M. Tumpey, N. Van Hoeven, V. S. Carter, M. J. Thomas, S. Proll, A. Solorzano, R. Billharz, et al. (2007)
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81, 11817-11827
|Abstract »|Full Text »|PDF »
Activation of Phosphatidylinositol 3-Kinase Signaling by the Nonstructural NS1 Protein Is Not Conserved among Type A and B Influenza Viruses.
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M. Shingai, T. Ebihara, N. A. Begum, A. Kato, T. Honma, K. Matsumoto, H. Saito, H. Ogura, M. Matsumoto, and T. Seya (2007)
J. Immunol.
179, 6123-6133
|Abstract »|Full Text »|PDF »
Vesicular Stomatitis Virus mRNA Capping Machinery Requires Specific cis-Acting Signals in the RNA.
J. T. Wang, L. E. McElvain, and S. P. J. Whelan (2007)
J. Virol.
81, 11499-11506
|Abstract »|Full Text »|PDF »
Differential Role of TLR- and RLR-Signaling in the Immune Responses to Influenza A Virus Infection and Vaccination.
S. Koyama, K. J. Ishii, H. Kumar, T. Tanimoto, C. Coban, S. Uematsu, T. Kawai, and S. Akira (2007)
J. Immunol.
179, 4711-4720
|Abstract »|Full Text »|PDF »
IFN Regulatory Factor Family Members Differentially Regulate the Expression of Type III IFN (IFN-{lambda}) Genes.
P. I. Osterlund, T. E. Pietila, V. Veckman, S. V. Kotenko, and I. Julkunen (2007)
J. Immunol.
179, 3434-3442
|Abstract »|Full Text »|PDF »
Persistent and Stable Gene Expression by a Cytoplasmic RNA Replicon Based on a Noncytopathic Variant Sendai Virus.
K. Nishimura, H. Segawa, T. Goto, M. Morishita, A. Masago, H. Takahashi, Y. Ohmiya, T. Sakaguchi, M. Asada, T. Imamura, et al. (2007)
J. Biol. Chem.
282, 27383-27391
|Abstract »|Full Text »|PDF »
Hepatitis C Virus Nonstructural Protein 5A Modulates the Toll-Like Receptor-MyD88-Dependent Signaling Pathway in Macrophage Cell Lines.
T. Abe, Y. Kaname, I. Hamamoto, Y. Tsuda, X. Wen, S. Taguwa, K. Moriishi, O. Takeuchi, T. Kawai, T. Kanto, et al. (2007)
J. Virol.
81, 8953-8966
|Abstract »|Full Text »|PDF »
The RNA Binding Domain of Influenza A Virus NS1 Protein Affects Secretion of Tumor Necrosis Factor Alpha, Interleukin-6, and Interferon in Primary Murine Tracheal Epithelial Cells.
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N. Jounai, F. Takeshita, K. Kobiyama, A. Sawano, A. Miyawaki, K.-Q. Xin, K. J. Ishii, T. Kawai, S. Akira, K. Suzuki, et al. (2007)
PNAS
104, 14050-14055
|Abstract »|Full Text »|PDF »
MyD88-Dependent Immune Activation Mediated by Human Immunodeficiency Virus Type 1-Encoded Toll-Like Receptor Ligands.
A. Meier, G. Alter, N. Frahm, H. Sidhu, B. Li, A. Bagchi, N. Teigen, H. Streeck, H.-J. Stellbrink, J. Hellman, et al. (2007)
J. Virol.
81, 8180-8191
|Abstract »|Full Text »|PDF »
Retinoic Acid-inducible Gene-I and Interferon-beta Promoter Stimulator-1 Augment Proapoptotic Responses Following Mammalian Reovirus Infection via Interferon Regulatory Factor-3.
G. H. Holm, J. Zurney, V. Tumilasci, S. Leveille, P. Danthi, J. Hiscott, B. Sherry, and T. S. Dermody (2007)
J. Biol. Chem.
282, 21953-21961
|Abstract »|Full Text »|PDF »
Negative regulation of MDA5- but not RIG-I-mediated innate antiviral signaling by the dihydroxyacetone kinase.
F. Diao, S. Li, Y. Tian, M. Zhang, L.-G. Xu, Y. Zhang, R.-P. Wang, D. Chen, Z. Zhai, B. Zhong, et al. (2007)
PNAS
104, 11706-11711
|Abstract »|Full Text »|PDF »
Multiple Anti-Interferon Actions of the Influenza A Virus NS1 Protein.
G. Kochs, A. Garcia-Sastre, and L. Martinez-Sobrido (2007)
J. Virol.
81, 7011-7021
|Abstract »|Full Text »|PDF »
Cytokine-Independent Upregulation of MDA5 in Viral Infection.
Comparative Prime-Boost Vaccinations Using Semliki Forest Virus, Adenovirus, and ALVAC Vectors Demonstrate Differences in the Generation of a Protective Central Memory CTL Response against the P815 Tumor.
T. I. Naslund, C. Uyttenhove, E. K. L. Nordstrom, D. Colau, G. Warnier, M. Jondal, B. J. Van den Eynde, and P. Liljestrom (2007)
J. Immunol.
178, 6761-6769
|Abstract »|Full Text »|PDF »
Murine Dendritic Cell Type I IFN Production Induced by Human IgG-RNA Immune Complexes Is IFN Regulatory Factor (IRF)5 and IRF7 Dependent and Is Required for IL-6 Production.
K. Yasuda, C. Richez, J. W. Maciaszek, N. Agrawal, S. Akira, A. Marshak-Rothstein, and I. R. Rifkin (2007)
J. Immunol.
178, 6876-6885
|Abstract »|Full Text »|PDF »
Triggering the Innate Antiviral Response through IRF-3 Activation.
Function of RIG-I-like Receptors in Antiviral Innate Immunity.
M. Yoneyama and T. Fujita (2007)
J. Biol. Chem.
282, 15315-15318
|Full Text »|PDF »
Loss of DExD/H Box RNA Helicase LGP2 Manifests Disparate Antiviral Responses.
T. Venkataraman, M. Valdes, R. Elsby, S. Kakuta, G. Caceres, S. Saijo, Y. Iwakura, and G. N. Barber (2007)
J. Immunol.
178, 6444-6455
|Abstract »|Full Text »|PDF »
Properties of H7N7 influenza A virus strain SC35M lacking interferon antagonist NS1 in mice and chickens.
G. Kochs, I. Koerner, L. Thiel, S. Kothlow, B. Kaspers, N. Ruggli, A. Summerfield, J. Pavlovic, J. Stech, and P. Staeheli (2007)
J. Gen. Virol.
88, 1403-1409
|Abstract »|Full Text »|PDF »
Regulation of Interferon Production by RIG-I and LGP2: A Lesson in Self-Control.
TLR3 Is Essential for the Induction of Protective Immunity against Punta Toro Virus Infection by the Double-Stranded RNA (dsRNA), Poly(I:C12U), but not Poly(I:C): Differential Recognition of Synthetic dsRNA Molecules.
B. B. Gowen, M.-H. Wong, K.-H. Jung, A. B. Sanders, W. M. Mitchell, L. Alexopoulou, R. A. Flavell, and R. W. Sidwell (2007)
J. Immunol.
178, 5200-5208
|Abstract »|Full Text »|PDF »
Classical Swine Fever Virus Npro Interacts with Interferon Regulatory Factor 3 and Induces Its Proteasomal Degradation.
O. Bauhofer, A. Summerfield, Y. Sakoda, J.-D. Tratschin, M. A. Hofmann, and N. Ruggli (2007)
J. Virol.
81, 3087-3096
|Abstract »|Full Text »|PDF »
Cutting Edge: Influenza A Virus Activates TLR3-Dependent Inflammatory and RIG-I-Dependent Antiviral Responses in Human Lung Epithelial Cells.
R. Le Goffic, J. Pothlichet, D. Vitour, T. Fujita, E. Meurs, M. Chignard, and M. Si-Tahar (2007)
J. Immunol.
178, 3368-3372
|Abstract »|Full Text »|PDF »
Autophagy-Dependent Viral Recognition by Plasmacytoid Dendritic Cells.
H. K. Lee, J. M. Lund, B. Ramanathan, N. Mizushima, and A. Iwasaki (2007)
Science
315, 1398-1401
|Abstract »|Full Text »|PDF »
Influenza virus targets the mRNA export machinery and the nuclear pore complex.
N. Satterly, P.-L. Tsai, J. van Deursen, D. R. Nussenzveig, Y. Wang, P. A. Faria, A. Levay, D. E. Levy, and B. M. A. Fontoura (2007)
PNAS
104, 1853-1858
|Abstract »|Full Text »|PDF »
Antiviral Signaling Through Pattern Recognition Receptors.
Regulation of innate antiviral defenses through a shared repressor domain in RIG-I and LGP2.
T. Saito, R. Hirai, Y.-M. Loo, D. Owen, C. L. Johnson, S. C. Sinha, S. Akira, T. Fujita, and M. Gale Jr. (2007)
PNAS
104, 582-587
|Abstract »|Full Text »|PDF »