Related Content
Search Google Scholar for:
More Information
Related Jobs from ScienceCareers
|
|
Science 25 March 2005: Vol. 307. no. 5717, pp. 1969 - 1972 DOI: 10.1126/science.1108329
|
|
Reports
RNA-Dependent Cysteine Biosynthesis in Archaea
Anselm Sauerwald,1
Wenhong Zhu,3
Tiffany A. Major,4
Hervé Roy,5
Sotiria Palioura,1
Dieter Jahn,6
William B. Whitman,4
John R. Yates, 3rd,3
Michael Ibba,5
Dieter Söll1,2*
Several methanogenic archaea lack cysteinyltransfer RNA (tRNA) synthetase (CysRS), the essential enzyme that provides Cys-tRNA Cys for translation in most organisms. Partial purification of the corresponding activity from Methanocaldococcus jannaschii indicated that tRNA Cys becomes acylated with O-phosphoserine (Sep) but not with cysteine. Further analyses identified a class IItype O-phosphoseryl-tRNA synthetase (SepRS) and Sep-tRNA:Cys-tRNA synthase (SepCysS). SepRS specifically forms Sep-tRNA Cys, which is then converted to Cys-tRNA Cys by SepCysS. Comparative genomic analyses suggest that this pathway, encoded in all organisms lacking CysRS, can also act as the sole route for cysteine biosynthesis. This was proven for Methanococcus maripaludis, where deletion of the SepRS-encoding gene resulted in cysteine auxotrophy. As the conversions of Sep-tRNA to Cys-tRNA or to selenocysteinyl-tRNA are chemically analogous, the catalytic activity of SepCysS provides a means by which both cysteine and selenocysteine may have originally been added to the genetic code.
1 Department of Molecular Biophysics and Biochemistry
2 Department of Chemistry, Yale University, New Haven, CT 065208114, USA.
3 Department of Cell Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
4 Department of Microbiology, University of Georgia, Athens, GA 306022605, USA.
5 Department of Microbiology, The Ohio State University, Columbus, OH 432101292, USA.
6 Department of Microbiology, Technische Universität Braunschweig, D-38106 Braunschweig, Germany.
Note added in proof: A recently published bioinformatics analysis has suggested that Mj1660 is a class II CysRS (32).
* To whom correspondence should be addressed. E-mail: soll{at}trna.chem.yale.edu
Read the Full Text
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- Pyrrolo-C as a molecular probe for monitoring conformations of the tRNA 3' end.
- C.-M. Zhang, C. Liu, T. Christian, H. Gamper, J. Rozenski, D. Pan, J. B. Randolph, E. Wickstrom, B. S. Cooperman, and Y.-M. Hou (2008)
RNA
14, 2245-2253
| Abstract »
| Full Text »
| PDF »
- The Homotetrameric Phosphoseryl-tRNA Synthetase from Methanosarcina mazei Exhibits Half-of-the-sites Activity.
- S. I. Hauenstein, Y.-M. Hou, and J. J. Perona (2008)
J. Biol. Chem.
283, 21997-22006
| Abstract »
| Full Text »
| PDF »
- Redundant Synthesis of Cysteinyl-tRNACys in Methanosarcina mazei.
- S. I. Hauenstein and J. J. Perona (2008)
J. Biol. Chem.
283, 22007-22017
| Abstract »
| Full Text »
| PDF »
- From one amino acid to another: tRNA-dependent amino acid biosynthesis.
- K. Sheppard, J. Yuan, M. J. Hohn, B. Jester, K. M. Devine, and D. Soll (2008)
Nucleic Acids Res.
36, 1813-1825
| Abstract »
| Full Text »
| PDF »
- Structural insights into RNA-dependent eukaryal and archaeal selenocysteine formation.
- Y. Araiso, S. Palioura, R. Ishitani, R. L. Sherrer, P. O'Donoghue, J. Yuan, H. Oshikane, N. Domae, J. DeFranco, D. Soll, et al. (2008)
Nucleic Acids Res.
36, 1187-1199
| Abstract »
| Full Text »
| PDF »
- Structure and Catalytic Mechanism of Eukaryotic Selenocysteine Synthase.
- O. M. Ganichkin, X.-M. Xu, B. A. Carlson, H. Mix, D. L. Hatfield, V. N. Gladyshev, and M. C. Wahl (2008)
J. Biol. Chem.
283, 5849-5865
| Abstract »
| Full Text »
| PDF »
- Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation.
- J. M. Kavran, S. Gundllapalli, P. O'Donoghue, M. Englert, D. Soll, and T. A. Steitz (2007)
PNAS
104, 11268-11273
| Abstract »
| Full Text »
| PDF »
- Toward understanding phosphoseryl-tRNACys formation: The crystal structure of Methanococcus maripaludis phosphoseryl-tRNA synthetase.
- S. Kamtekar, M. J. Hohn, H.-S. Park, M. Schnitzbauer, A. Sauerwald, D. Soll, and T. A. Steitz (2007)
PNAS
104, 2620-2625
| Abstract »
| Full Text »
| PDF »
- Biosynthesis of Phosphoserine in the Methanococcales.
- S. Helgadottir, G. Rosas-Sandoval, D. Soll, and D. E. Graham (2007)
J. Bacteriol.
189, 575-582
| Abstract »
| Full Text »
| PDF »
- RNA-dependent conversion of phosphoserine forms selenocysteine in eukaryotes and archaea.
- J. Yuan, S. Palioura, J. C. Salazar, D. Su, P. O'Donoghue, M. J. Hohn, A. M. Cardoso, W. B. Whitman, and D. Soll (2006)
PNAS
103, 18923-18927
| Abstract »
| Full Text »
| PDF »
- A single tRNA base pair mediates bacterial tRNA-dependent biosynthesis of asparagine.
- M. Bailly, S. Giannouli, M. Blaise, C. Stathopoulos, D. Kern, and H. D. Becker (2006)
Nucleic Acids Res.
34, 6083-6094
| Abstract »
| Full Text »
| PDF »
- Emergence of the universal genetic code imprinted in an RNA record.
- M. J. Hohn, H.-S. Park, P. O'Donoghue, M. Schnitzbauer, and D. Soll (2006)
PNAS
103, 18095-18100
| Abstract »
| Full Text »
| PDF »
- The global structures of a wild-type and poorly functional plant luteoviral mRNA pseudoknot are essentially identical.
- P. V. Cornish, S. N. Stammler, and D. P. Giedroc (2006)
RNA
12, 1959-1969
| Abstract »
| Full Text »
| PDF »
- New surprises in genetic coding and how an ingenious experiment was almost scooped, by evolution.
- T. Pederson (2006)
FASEB J
20, 1759-1760
| Abstract »
| Full Text »
| PDF »
- Collective evolution and the genetic code.
- K. Vetsigian, C. Woese, and N. Goldenfeld (2006)
PNAS
103, 10696-10701
| Abstract »
| Full Text »
| PDF »
- Structural basis of RNA-dependent recruitment of glutamine to the genetic code..
- H. Oshikane, K. Sheppard, S. Fukai, Y. Nakamura, R. Ishitani, T. Numata, R. L. Sherrer, L. Feng, E. Schmitt, M. Panvert, et al. (2006)
Science
312, 1950-1954
| Abstract »
| Full Text »
| PDF »
- Supramolecular complexes mediate selenocysteine incorporation in vivo..
- A. Small-Howard, N. Morozova, Z. Stoytcheva, E. P. Forry, J. B. Mansell, J. W. Harney, B. A. Carlson, X.-m. Xu, D. L. Hatfield, and M. J. Berry (2006)
Mol. Cell. Biol.
26, 2337-2346
| Abstract »
| Full Text »
| PDF »
- The evolutionary history of Cys-tRNACys formation.
- P. O'Donoghue, A. Sethi, C. R. Woese, and Z. A. Luthey-Schulten (2005)
PNAS
102, 19003-19008
| Abstract »
| Full Text »
| PDF »
- Loss of Editing Activity during the Evolution of Mitochondrial Phenylalanyl-tRNA Synthetase.
- H. Roy, J. Ling, J. Alfonzo, and M. Ibba (2005)
J. Biol. Chem.
280, 38186-38192
| Abstract »
| Full Text »
| PDF »
|
|