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Science 27 September 2002: Vol. 297. no. 5590, pp. 2270 - 2275 DOI: 10.1126/science.1072152
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Reports
Gene Expression During the Life Cycle of Drosophila melanogaster
Michelle N. Arbeitman,1*
Eileen E. M. Furlong,235
Farhad Imam,34*
Eric Johnson,346*
Brian H. Null,27*
Bruce S. Baker,1
Mark A. Krasnow,34
Matthew P. Scott,24
Ronald W. Davis,37
Kevin P. White78
Molecular genetic studies of Drosophila
melanogaster have led to profound advances in understanding the
regulation of development. Here we report gene expression patterns for
nearly one-third of all Drosophila genes during a complete
time course of development. Mutations that eliminate eye or germline
tissue were used to further analyze tissue-specific gene expression
programs. These studies define major characteristics of the
transcriptional programs that underlie the life cycle, compare
development in males and females, and show that large-scale gene
expression data collected from whole animals can be used to identify
genes expressed in particular tissues and organs or genes involved in
specific biological and biochemical processes.
1 Department of Biological Sciences,
2 Department of Developmental Biology and Department
of Genetics,
3 Department of Biochemistry,
4 Howard Hughes Medical Institute, Stanford
University, Stanford, CA 94305, USA.
5 Developmental Biology
Program, European Molecular Biology Laboratory, 69117 Heidelberg,
Germany.
6 Institute of Molecular Biology, University of
Oregon, Eugene, OR 97403, USA.
7 Stanford Genome Technology
Center, 855 California Avenue, Palo Alto, CA 94306, USA.
8 Department of Genetics, Yale University School of
Medicine, New Haven, CT 06520, USA.
*
Co-first authors
To whom correspondence should be addressed. E-mail:
kevin.white{at}yale.edu
Read the Full Text
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- K. H. Takahashi, K. Tanaka, M. Itoh, and T. Takano-Shimizu (2009)
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| Abstract »
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| PDF »
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- B. Ahsan, T. L. Saito, S.-i. Hashimoto, K. Muramatsu, M. Tsuda, A. Sasaki, K. Matsushima, T. Aigaki, and S. Morishita (2009)
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| Abstract »
| Full Text »
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| Abstract »
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| PDF »
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| Abstract »
| Full Text »
| PDF »
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| Abstract »
| Full Text »
| PDF »
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| Abstract »
| Full Text »
| PDF »
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| Abstract »
| Full Text »
| PDF »
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- Y. Qu and S. Xu (2006)
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23, 1558-1573
| Abstract »
| Full Text »
| PDF »
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- M. G. Grigorov (2006)
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22, 1424-1430
| Abstract »
| Full Text »
| PDF »
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- G. Liu, J. Roy, and E. A. Johnson (2006)
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| Abstract »
| Full Text »
| PDF »
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- P. Ma, C. I. Castillo-Davis, W. Zhong, and J. S. Liu (2006)
Nucleic Acids Res.
34, 1261-1269
| Abstract »
| Full Text »
| PDF »
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- F. Pilot, J.-M. Philippe, C. Lemmers, J.-P. Chauvin, and T. Lecuit (2006)
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| Abstract »
| Full Text »
| PDF »
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- K. Duncan, M. Grskovic, C. Strein, K. Beckmann, R. Niggeweg, I. Abaza, F. Gebauer, M. Wilm, and M. W. Hentze (2006)
Genes & Dev.
20, 368-379
| Abstract »
| Full Text »
| PDF »
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- I. Abaza, O. Coll, S. Patalano, and F. Gebauer (2006)
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20, 380-389
| Abstract »
| Full Text »
| PDF »
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- X. Leng and H.-G. Muller (2006)
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22, 68-76
| Abstract »
| Full Text »
| PDF »
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- R. A. Hoskins, M. Stapleton, R. A. George, C. Yu, K. H. Wan, J. W. Carlson, and S. E. Celniker (2005)
Nucleic Acids Res.
33, e185
| Abstract »
| Full Text »
| PDF »
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- P. Badenhorst, H. Xiao, L. Cherbas, S. Y. Kwon, M. Voas, I. Rebay, P. Cherbas, and C. Wu (2005)
Genes & Dev.
19, 2540-2545
| Abstract »
| Full Text »
| PDF »
- The Drosophila MSL complex activates the transcription of target genes.
- T. Straub, G. D. Gilfillan, V. K. Maier, and P. B. Becker (2005)
Genes & Dev.
19, 2284-2288
| Abstract »
| Full Text »
| PDF »
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- A. M. Boutanaev, L. M. Mikhaylova, and D. I. Nurminsky (2005)
Mol. Cell. Biol.
25, 8379-8386
| Abstract »
| Full Text »
| PDF »
- Pesticide Resistance via Transposition-Mediated Adaptive Gene Truncation in Drosophila.
- Y. T. Aminetzach, J. M. Macpherson, and D. A. Petrov (2005)
Science
309, 764-767
| Abstract »
| Full Text »
| PDF »
- Genome-wide survey of V-ATPase genes in Drosophila reveals a conserved renal phenotype for lethal alleles.
- A. K. Allan, J. Du, S. A. Davies, and J. A. T. Dow (2005)
Physiol Genomics
22, 128-138
| Abstract »
| Full Text »
| PDF »
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- B. Dermaut, K. K. Norga, A. Kania, P. Verstreken, H. Pan, Y. Zhou, P. Callaerts, and H. J. Bellen (2005)
J. Cell Biol.
170, 127-139
| Abstract »
| Full Text »
| PDF »
- Genomic analysis of Drosophila chromosome underreplication reveals a link between replication control and transcriptional territories.
- S. N. Belyakin, G. K. Christophides, A. A. Alekseyenko, E. V. Kriventseva, E. S. Belyaeva, R. A. Nanayev, I. V. Makunin, Heidelberg Fly Array Consortium, F. C. Kafatos, and I. F. Zhimulev (2005)
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102, 8269-8274
| Abstract »
| Full Text »
| PDF »
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- W.J. Kent, F. Hsu, D. Karolchik, R. M. Kuhn, H. Clawson, H. Trumbower, and D. Haussler (2005)
Genome Res.
15, 737-741
| Abstract »
| Full Text »
| PDF »
- Balancing protein similarity and gene co-expression reveals new links between genetic conservation and developmental diversity in invertebrates.
- C. Lefebvre, J.-C. Aude, E. Glemet, and C. Neri (2005)
Bioinformatics
21, 1550-1558
| Abstract »
| Full Text »
| PDF »
- New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones.
- A. G. Fernandez, K. C. Gunsalus, J. Huang, L.-S. Chuang, N. Ying, H.-l. Liang, C. Tang, A. J. Schetter, C. Zegar, J.-F. Rual, et al. (2005)
Genome Res.
15, 250-259
| Abstract »
| Full Text »
| PDF »
- A more efficient search strategy for aging genes based on connectivity.
- L. Ferrarini, L. Bertelli, J. Feala, A. D. McCulloch, and G. Paternostro (2005)
Bioinformatics
21, 338-348
| Abstract »
| Full Text »
| PDF »
- Microarray analysis of pediatric ependymoma identifies a cluster of 112 candidate genes including four transcripts at 22q12.1-q13.3.
- B. Suarez-Merino, M. Hubank, T. Revesz, W. Harkness, R. Hayward, D. Thompson, J. L. Darling, D. G.T. Thomas, and T. J. Warr (2005)
Neuro-oncol
7, 20-31
| Abstract »
| PDF »
- FlyBase: genes and gene models.
- R. A. Drysdale, M. A. Crosby, and The FlyBase Consortium (2005)
Nucleic Acids Res.
33, D390-D395
| Abstract »
| Full Text »
| PDF »
- Sexual and Temporal Dynamics of Molecular Evolution in C. elegans Development.
- A. D. Cutter and S. Ward (2005)
Mol. Biol. Evol.
22, 178-188
| Abstract »
| Full Text »
| PDF »
- From the Cover: Identification of alternative splicing regulators by RNA interference in Drosophila.
- J. W. Park, K. Parisky, A. M. Celotto, R. A. Reenan, and B. R. Graveley (2004)
PNAS
101, 15974-15979
| Abstract »
| Full Text »
| PDF »
- Combining biological networks to predict genetic interactions.
- S. L. Wong, L. V. Zhang, A. H. Y. Tong, Z. Li, D. S. Goldberg, O. D. King, G. Lesage, M. Vidal, B. Andrews, H. Bussey, et al. (2004)
PNAS
101, 15682-15687
| Abstract »
| Full Text »
| PDF »
- Additivity and trans-acting Effects on Gene Expression in Male Drosophila simulans.
- M. L. Wayne, Y.-J. Pan, S. V. Nuzhdin, and L. M. McIntyre (2004)
Genetics
168, 1413-1420
| Abstract »
| Full Text »
| PDF »
- A Gene Expression Map for the Euchromatic Genome of Drosophila melanogaster.
- V. Stolc, Z. Gauhar, C. Mason, G. Halasz, M. F. van Batenburg, S. A. Rifkin, S. Hua, T. Herreman, W. Tongprasit, P. E. Barbano, et al. (2004)
Science
306, 655-660
| Abstract »
| Full Text »
| PDF »
- Extensive Sex-Specific Nonadditivity of Gene Expression in Drosophila melanogaster.
- G. Gibson, R. Riley-Berger, L. Harshman, A. Kopp, S. Vacha, S. Nuzhdin, and M. Wayne (2004)
Genetics
167, 1791-1799
| Abstract »
| Full Text »
| PDF »
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- M. A. Shifman, R. Srivastava, C. A. Brandt, T.-R. Li, K. White, and P. L. Miller (2004)
J. Am. Med. Inform. Assoc.
11, 294-299
| Abstract »
| Full Text »
| PDF »
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- V. Vitvitsky, S. Dayal, S. Stabler, Y. Zhou, H. Wang, S. R. Lentz, and R. Banerjee (2004)
Am J Physiol Regulatory Integrative Comp Physiol
287, R39-R46
| Abstract »
| Full Text »
| PDF »
- Genome-wide transcription profile of field- and laboratory-selected dichlorodiphenyltrichloroethane (DDT)-resistant Drosophila.
- J. H. F. Pedra, L. M. McIntyre, M. E. Scharf, and B. R. Pittendrigh (2004)
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101, 7034-7039
| Abstract »
| Full Text »
| PDF »
- Troponin I is required for myofibrillogenesis and sarcomere formation in Drosophila flight muscle.
- U. Nongthomba, S. Clark, M. Cummins, M. Ansari, M. Stark, and J. C. Sparrow (2004)
J. Cell Sci.
117, 1795-1805
| Abstract »
| Full Text »
| PDF »
- A genomic analysis of Drosophila somatic sexual differentiation and its regulation.
- M. N. Arbeitman, A. A. Fleming, M. L. Siegal, B. H. Null, and B. S. Baker (2004)
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131, 2007-2021
| Abstract »
| Full Text »
| PDF »
- Genetic characterization of the Drosophila homologue of coronin.
- V. Bharathi, S. K. Pallavi, R. Bajpai, B. S. Emerald, and L. S. Shashidhara (2004)
J. Cell Sci.
117, 1911-1922
| Abstract »
| Full Text »
| PDF »
- Anomalies in the Expression Profile of Interspecific Hybrids of Drosophila melanogaster and Drosophila simulans.
- J. M. Ranz, K. Namgyal, G. Gibson, and D. L. Hartl (2004)
Genome Res.
14, 373-379
| Abstract »
| Full Text »
| PDF »
- Intensity-based analysis of two-colour microarrays enables efficient and flexible hybridization designs.
- P. A. C. 't Hoen, R. Turk, J. M. Boer, E. Sterrenburg, R. X. de Menezes, G.-J. B. van Ommen, and J. T. den Dunnen (2004)
Nucleic Acids Res.
32, e41
| Abstract »
| Full Text »
| PDF »
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- E. B. Dubrovsky, V. A. Dubrovskaya, L. Levinger, S. Schiffer, and A. Marchfelder (2004)
Nucleic Acids Res.
32, 255-262
| Abstract »
| Full Text »
| PDF »
- A functional genomic screen for cardiogenic genes using RNA interference in developing Drosophila embryos.
- Y.-O. Kim, S.-J. Park, R. S. Balaban, M. Nirenberg, and Y. Kim (2004)
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101, 159-164
| Abstract »
| Full Text »
| PDF »
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- R. Artero, E. E. Furlong, K. Beckett, M. P. Scott, and M. Baylies (2003)
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130, 6257-6272
| Abstract »
| Full Text »
| PDF »
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- F. Greil, I. van der Kraan, J. Delrow, J. F. Smothers, E. de Wit, H. J. Bussemaker, R. van Driel, S. Henikoff, and B. van Steensel (2003)
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| Abstract »
| Full Text »
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- D. R. Dorer, J. A. Rudnick, E. N. Moriyama, and A. C. Christensen (2003)
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- D. Harris, C. Orme, J. Kramer, L. Namba, M. Champion, M. J. Palladino, J. Natzle, and R. S. Hawley (2003)
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| Full Text »
| PDF »
- The Evolution of Transcriptional Regulation in Eukaryotes.
- G. A. Wray, M. W. Hahn, E. Abouheif, J. P. Balhoff, M. Pizer, M. V. Rockman, and L. A. Romano (2003)
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| Abstract »
| Full Text »
| PDF »
- Rapid evolution of male-biased gene expression in Drosophila.
- C. D. Meiklejohn, J. Parsch, J. M. Ranz, and D. L. Hartl (2003)
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| Abstract »
| Full Text »
| PDF »
- Protein-DNA interaction mapping using genomic tiling path microarrays in Drosophila.
- L. V. Sun, L. Chen, F. Greil, N. Negre, T.-R. Li, G. Cavalli, H. Zhao, B. van Steensel, and K. P. White (2003)
PNAS
100, 9428-9433
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- The computational analysis of scientific literature to define and recognize gene expression clusters.
- S. Raychaudhuri, J. T. Chang, F. Imam, and R. B. Altman (2003)
Nucleic Acids Res.
31, 4553-4560
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- Combining Gene Expression and Molecular Marker Information for Mapping Complex Trait Genes: A Simulation Study.
- M. Perez-Enciso, M. A. Toro, M. Tenenhaus, and D. Gianola (2003)
Genetics
164, 1597-1606
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- Further Properties of Gavrilets' One-Locus Two-Allele Model of Maternal Selection.
- H. G. Spencer (2003)
Genetics
164, 1689-1692
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- Sex-Dependent Gene Expression and Evolution of the Drosophila Transcriptome.
- J. M. Ranz, C. I. Castillo-Davis, C. D. Meiklejohn, and D. L. Hartl (2003)
Science
300, 1742-1745
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- RNA editing and regulation of Drosophila 4f-rnp expression by sas-10 antisense readthrough mRNA transcripts.
- N. T. PETERS, J. A. ROHRBACH, B. A. ZALEWSKI, C. M. BYRKETT, and J. C. VAUGHN (2003)
RNA
9, 698-710
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- Public Access for Teaching Genomics, Proteomics, and Bioinformatics.
- A. M. Campbell (2003)
CBE Life Sci Educ
2, 98-111
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- Mate choice theory and the mode of selection in sexual populations.
- H. L. Carson (2003)
PNAS
100, 6584-6587
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- DNA microarrays and development.
- L. Smith and A. Greenfield (2003)
Hum. Mol. Genet.
12, R1-8
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- DNA Arrays: Applications and Implications for Circadian Biology.
- T. K. Sato, S. Panda, S. A. Kay, and J. B. Hogenesch (2003)
J Biol Rhythms
18, 96-105
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