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Science 5 July 2002: Vol. 297. no. 5578, pp. 108 - 110 DOI: 10.1126/science.1069757
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Reports
Alternatively Spliced TCR mRNA Induced by Disruption of Reading Frame
Jun Wang,
John I. Hamilton,
Mark S. Carter,*
Shulin Li,
Miles F. Wilkinson
Nonsense codons that prematurely terminate translation generate
potentially deleterious truncated proteins. Here, we show that the T
cell receptor- (TCR ) gene, which acquires in-frame nonsense codons at high frequency during normal lymphocyte development, gives rise to an alternatively spliced transcript [alternative messenger RNA (alt-mRNA)] that skips the offending mutations that generate such nonsense codons. This alt-mRNA is up-regulated by a
transfer RNA-dependent scanning mechanism that responds specifically to mutations that disrupt the reading frame. The finding that translation signals regulate the levels of alternatively spliced mRNAs
generated in the nucleus may alter the current view of how gene
expression is controlled in eukaryotic cells.
Department of Immunology, The University of Texas
M. D. Anderson Cancer Center, Box 180, 1515 Holcombe Boulevard,
Houston, TX 77030, USA.
*
Present address: Department of Microbiology and Immunology,
Stanford University School of Medicine, Stanford, CA 94305-5124, USA.
Present address: Department of Surgery/Otolaryngology, 2799 West Grand Boulevard, Henry Ford Health System, Detroit, MI 48202, USA.
To whom correspondence should be addressed. E-mail:
mwilkins{at}mail.mdanderson.org
Read the Full Text
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- Nonsense Codons Trigger an RNA Partitioning Shift.
- A. D. Bhalla, J. P. Gudikote, J. Wang, W.-K. Chan, Y.-F. Chang, O. R. Olivas, and M. F. Wilkinson (2009)
J. Biol. Chem.
284, 4062-4072
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- L. Ajamian, L. Abrahamyan, M. Milev, P. V. Ivanov, A. E. Kulozik, N. H. Gehring, and A. J. Mouland (2008)
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- The editing enzyme ADAR1 and the mRNA surveillance protein hUpf1 interact in the cell nucleus.
- L. Agranat, O. Raitskin, J. Sperling, and R. Sperling (2008)
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105, 5028-5033
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- Alternatively Spliced T-cell Receptor Transcripts Are Up-regulated in Response to Disruption of Either Splicing Elements or Reading Frame.
- Y.-F. Chang, W.-K. Chan, J. S. Imam, and M. F. Wilkinson (2007)
J. Biol. Chem.
282, 29738-29747
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- Quality control of eukaryotic mRNA: safeguarding cells from abnormal mRNA function.
- O. Isken and L. E. Maquat (2007)
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21, 1833-3856
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- Exon skipping through the creation of a putative exonic splicing silencer as a consequence of the cystic fibrosis mutation R553X.
- I. Aznarez, J. Zielenski, J. M Rommens, B. J Blencowe, and L.-C. Tsui (2007)
J. Med. Genet.
44, 341-346
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- AUG sequences are required to sustain nonsense-codon-mediated suppression of splicing.
- E. Kamhi, G. Yahalom, G. Kass, Y. Hacham, R. Sperling, and J. Sperling (2006)
Nucleic Acids Res.
34, 3421-3433
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- Disruption of an exon splicing enhancer in exon 3 of MLH1 is the cause of HNPCC in a Quebec family.
- S McVety, L Li, P H Gordon, G Chong, and W D Foulkes (2006)
J. Med. Genet.
43, 153-156
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- Nonsense-associated alternative splicing of T-cell receptor {beta} genes: No evidence for frame dependence.
- F. MOHN, M. BUHLER, and O. MUHLEMANN (2005)
RNA
11, 147-156
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- Alternative splicing induced by nonsense mutations in the immunoglobulin {micro} VDJ exon is independent of truncation of the open reading frame.
- M. BUHLER and O. MUHLEMANN (2005)
RNA
11, 139-146
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- Stop codon-mediated suppression of splicing is a novel nuclear scanning mechanism not affected by elements of protein synthesis and NMD.
- C. WACHTEL, B. LI, J. SPERLING, and R. SPERLING (2004)
RNA
10, 1740-1750
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- The case for nuclear translation.
- F. J. Iborra, D. A. Jackson, and P. R. Cook (2004)
J. Cell Sci.
117, 5713-5720
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- Premature termination codons do not affect the rate of splicing of neighboring introns.
- J. R. LYTLE and J. A. STEITZ (2004)
RNA
10, 657-668
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- Regulation of splicing: The importance of being translatable.
- E. MIRIAMI, R. SPERLING, J. SPERLING, and U. MOTRO (2004)
RNA
10, 1-4
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| PDF »
- A frameshifting mutation in CHRNE unmasks skipping of the preceding exon.
- K. Ohno, M. Milone, X.-M. Shen, and A. G. Engel (2003)
Hum. Mol. Genet.
12, 3055-3066
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- A Hox gene mutation that triggers nonsense-mediated RNA decay and affects alternative splicing during Drosophila development.
- C. R. Alonso and M. Akam (2003)
Nucleic Acids Res.
31, 3873-3880
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- Missense, Nonsense, and Neutral Mutations Define Juxtaposed Regulatory Elements of Splicing in Cystic Fibrosis Transmembrane Regulator Exon 9.
- F. Pagani, E. Buratti, C. Stuani, and F. E. Baralle (2003)
J. Biol. Chem.
278, 26580-26588
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- The effect of nonsense codons on splicing: A genomic analysis.
- X. ZHANG, J. LEE, and L. A. CHASIN (2003)
RNA
9, 637-639
| Abstract »
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- Nuclear translation: What is the evidence?.
- J. E. DAHLBERG, E. LUND, and E. B. GOODWIN (2003)
RNA
9, 1-8
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- Separable Roles for rent1/hUpf1 in Altered Splicing and Decay of Nonsense Transcripts.
- J. T. Mendell, C. M. J. ap Rhys, and H. C. Dietz (2002)
Science
298, 419-422
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- NASty effects on fibrillin pre-mRNA splicing: another case of ESE does it, but proposals for translation-dependent splice site choice live on.
- L. E. Maquat (2002)
Genes & Dev.
16, 1743-1753
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