Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.
Molecular Evidence for the Early Colonization of Land by Fungi and Plants
Daniel S. Heckman,1David M. Geiser,2Brooke R. Eidell,1Rebecca L. Stauffer,1Natalie L. Kardos,1S. Blair Hedges1*
The colonization of land by eukaryotes probably was
facilitated by a partnership (symbiosis) between a photosynthesizing
organism(phototroph) and a fungus. However, the time when
colonizationoccurred remains speculative. The first fossil land plants
andfungi appeared 480 to 460 million years ago (Ma), whereas molecularclock estimates suggest an earlier colonization of land, about600 Ma.
Our protein sequence analyses indicate that green algaeand major
lineages of fungi were present 1000 Ma and that landplants appeared by
700 Ma, possibly affecting Earth's atmosphere,climate, and
evolution of animals in the Precambrian.
1 Astrobiology Research Center and Department
of Biology,
2 Department of Plant Pathology,
Pennsylvania State University, University Park, PA 16802, USA.
*
To whom correspondence should be addressed: Department of
Biology, 208 Mueller Laboratory, Pennsylvania State University,University Park, PA 16802, USA; e-mail: sbh1{at}psu.edu
Analysis of a xyloglucan endotransglycosylase/hydrolase (XTH) from the lycopodiophyte Selaginella kraussiana suggests that XTH sequence characteristics and function are highly conserved during the evolution of vascular plants.
V. S. T. Van Sandt, Y. Guisez, J.-P. Verbelen, and K. Vissenberg (2006)
J. Exp. Bot.
57, 2909-2922
|Abstract »|Full Text »|PDF »
Late Precambrian Oxygenation; Inception of the Clay Mineral Factory.
M. Kennedy, M. Droser, L. M. Mayer, D. Pevear, and D. Mrofka (2006)
Science
311, 1446-1449
|Abstract »|Full Text »|PDF »
Animal Evolution and the Molecular Signature of Radiations Compressed in Time.
ATM Activation and Its Recruitment to Damaged DNA Require Binding to the C Terminus of Nbs1.
Z. You, C. Chahwan, J. Bailis, T. Hunter, and P. Russell (2005)
Mol. Cell. Biol.
25, 5363-5379
|Abstract »|Full Text »|PDF »
Comparative transcriptomics of rice reveals an ancient pattern of response to microbial colonization.
S. Guimil, H.-S. Chang, T. Zhu, A. Sesma, A. Osbourn, C. Roux, V. Ioannidis, E. J. Oakeley, M. Docquier, P. Descombes, et al. (2005)
PNAS
102, 8066-8070
|Abstract »|Full Text »|PDF »
Protoascon missouriensis, a complex fossil microfungus revisited.
T. N. Taylor, M. Krings, S. D. Klavins, and E. L. Taylor (2005)
Mycologia
97, 725-729
|Abstract »|Full Text »|PDF »
Identification of Cell Cycle-regulated Genes in Fission Yeast.
X. Peng, R. K. M. Karuturi, L. D. Miller, K. Lin, Y. Jia, P. Kondu, L. Wang, L.-S. Wong, E. T. Liu, M. K. Balasubramanian, et al. (2005)
Mol. Biol. Cell
16, 1026-1042
|Abstract »|Full Text »|PDF »
Dating the Dipsacales: comparing models, genes, and evolutionary implications.
Gene Discovery and Expression Profile Analysis through Sequencing of Expressed Sequence Tags from Different Developmental Stages of the Chytridiomycete Blastocladiella emersonii.
K. F. Ribichich, S. M. Salem-Izacc, R. C. Georg, R. Z. N. Vencio, L. D. Navarro, and S. L. Gomes (2005)
Eukaryot. Cell
4, 455-464
|Abstract »|Full Text »|PDF »
A Functional Screen Identifies Lateral Transfer of {beta}-Glucuronidase (gus) from Bacteria to Fungi.
P. Wenzl, L. Wong, K. Kwang-won, and R. A. Jefferson (2005)
Mol. Biol. Evol.
22, 308-316
|Abstract »|Full Text »|PDF »
Probable Proterozoic fungi.
(2005)
Paleobiology
31, 165-182
Differential Expression on a Daily Basis of Plastid Sigma Factor Genes from the Moss Physcomitrella patens. Regulatory Interactions among PpSig5, the Circadian Clock, and Blue Light Signaling Mediated by Cryptochromes.
K. Ichikawa, M. Sugita, T. Imaizumi, M. Wada, and S. Aoki (2004)
Plant Physiology
136, 4285-4298
|Abstract »|Full Text »|PDF »
The timing of eukaryotic evolution: Does a relaxed molecular clock reconcile proteins and fossils?.
E. J. P. Douzery, E. A. Snell, E. Bapteste, F. Delsuc, and H. Philippe (2004)
PNAS
101, 15386-15391
|Abstract »|Full Text »|PDF »
Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits.
F. Lutzoni, F. Kauff, C. J. Cox, D. McLaughlin, G. Celio, B. Dentinger, M. Padamsee, D. Hibbett, T. Y. James, E. Baloch, et al. (2004)
Am. J. Botany
91, 1446-1480
|Abstract »|Full Text »|PDF »
M. J. Sanderson, J. L. Thorne, N. Wikstrom, and K. Bremer (2004)
Am. J. Botany
91, 1656-1665
|Abstract »|Full Text »|PDF »
A Molecular Timeline for the Origin of Photosynthetic Eukaryotes.
H. S. Yoon, J. D. Hackett, C. Ciniglia, G. Pinto, and D. Bhattacharya (2004)
Mol. Biol. Evol.
21, 809-818
|Abstract »|Full Text »|PDF »
Evolutionary conservation of a phosphate transporter in the arbuscular mycorrhizal symbiosis.
V. Karandashov, R. Nagy, S. Wegmuller, N. Amrhein, and M. Bucher (2004)
PNAS
101, 6285-6290
|Abstract »|Full Text »|PDF »
Novel P-Type ATPases Mediate High-Affinity Potassium or Sodium Uptake in Fungi.
B. Benito, B. Garciadeblas, P. Schreier, and A. Rodriguez-Navarro (2004)
Eukaryot. Cell
3, 359-368
|Abstract »|Full Text »|PDF »
Medicago truncatula DMI1 Required for Bacterial and Fungal Symbioses in Legumes.
J.-M. Ane, G. B. Kiss, B. K. Riely, R. V. Penmetsa, G. E. D. Oldroyd, C. Ayax, J. Levy, F. Debelle, J.-M. Baek, P. Kalo, et al. (2004)
Science
303, 1364-1367
|Abstract »|Full Text »|PDF »
Ancient DNA Enables Timing of the Pleistocene Origin and Holocene Expansion of Two Adelie Penguin Lineages in Antarctica.
P. A. Ritchie, C. D. Millar, G. C. Gibb, C. Baroni, and D. M. Lambert (2004)
Mol. Biol. Evol.
21, 240-248
|Abstract »|Full Text »|PDF »
Circadian Expression of the PpLhcb2 Gene Encoding a Major Light-Harvesting Chlorophyll a/b-Binding Protein in the Moss Physcomitrella patens.
S. Aoki, S. Kato, K. Ichikawa, and M. Shimizu (2004)
Plant Cell Physiol.
45, 68-76
|Abstract »|Full Text »|PDF »
Phylogenetic evidence for the early evolution of microcystin synthesis.
A. Rantala, D. P. Fewer, M. Hisbergues, L. Rouhiainen, J. Vaitomaa, T. Borner, and K. Sivonen (2004)
PNAS
101, 568-573
|Abstract »|Full Text »|PDF »
Cretaceous and Eocene poroid hymenophores from Vancouver Island, British Columbia.
J. Pawlowski, M. Holzmann, C. Berney, J. Fahrni, A. J. Gooday, T. Cedhagen, A. Habura, and S. S. Bowser (2003)
PNAS
100, 11494-11498
|Abstract »|Full Text »|PDF »
Divergence in mycorrhizal specialization within Hexalectris spicata (Orchidaceae), a nonphotosynthetic desert orchid.
D. L. Taylor, T. D. Bruns, T. M. Szaro, and S. A. Hodges (2003)
Am. J. Botany
90, 1168-1179
|Abstract »|Full Text »|PDF »
Another fossil agaric from Dominican amber.
D. S. Hibbett, M. Binder, Z. Wang, and Y. Goldman (2003)
Mycologia
95, 685-687
|Abstract »|Full Text »|PDF »
Schizosaccharomyces pombe Essential Genes: A Pilot Study.
A. Decottignies, I. Sanchez-Perez, and P. Nurse (2003)
Genome Res.
13, 399-406
|Abstract »|Full Text »|PDF »
Loss of Compartmentalization Causes Misregulation of Lysine Biosynthesis in Peroxisome-Deficient Yeast Cells.
R. Breitling, O. Sharif, M. L. Hartman, and S. K. Krisans (2002)
Eukaryot. Cell
1, 978-986
|Abstract »|Full Text »|PDF »
Estimation of Nucleotide Substitution Rates in Eurotiomycete Fungi.
T. Kasuga, T. J. White, and J. W. Taylor (2002)
Mol. Biol. Evol.
19, 2318-2324
|Full Text »|PDF »
Seaweeds in Cold Seas: Evolution and Carbon Acquisition.
J. A. RAVEN, A. M. JOHNSTON, J. E. KUBLER, R. KORB, S. G. MCINROY, L. L. HANDLEY, C. M. SCRIMGEOUR, D. I. WALKER, J. BEARDALL, M. N. CLAYTON, et al. (2002)
Ann. Bot.
90, 525-536
|Abstract »|Full Text »|PDF »
Red Bed-Hosted Oncolitic Manganese Ore of the Paleoproterozoic Soutpansberg Group, Bronkhorstfontein, South Africa.
J. Gutzmer, J. Gutzmer, M. O. Schaefer, and N. J. Beukes (2002)
Economic Geology
97, 1151-1166
|Abstract »|Full Text »|PDF »
Evolution and Organization of a Highly Dynamic, Subtelomeric Helicase Gene Family in the Rice Blast Fungus Magnaporthe grisea.
W. Gao, C. H. Khang, S.-Y. Park, Y.-H. Lee, and S. Kang (2002)
Genetics
162, 103-112
|Abstract »|Full Text »|PDF »
A methodological bias toward overestimation of molecular evolutionary time scales.
F. Rodriguez-Trelles, R. Tarrio, and F. J. Ayala (2002)
PNAS
99, 8112-8115
|Abstract »|Full Text »|PDF »
Morphologically complex plant macrofossils from the Late Silurian of Arctic Canada.
M. E. Kotyk, J. F. Basinger, P. G. Gensel, and T. A. de Freitas (2002)
Am. J. Botany
89, 1004-1013
|Abstract »|Full Text »|PDF »
Rate heterogeneity among lineages of tracheophytes: Integration of molecular and fossil data and evidence for molecular living fossils.
P. S. Soltis, D. E. Soltis, V. Savolainen, P. R. Crane, and T. G. Barraclough (2002)
PNAS
99, 4430-4435
|Abstract »|Full Text »|PDF »
The Moss Physcomitrella patens, Now and Then.
D. G. Schaefer and J.-P. Zryd (2001)
Plant Physiology
127, 1430-1438
|Full Text »|PDF »
Rate heterogeneity among lineages of tracheophytes: Integration of molecular and fossil data and evidence for molecular living fossils.
P. S. Soltis, D. E. Soltis, V. Savolainen, P. R. Crane, and T. G. Barraclough (2002)
PNAS
99, 4430-4435
|Abstract »|Full Text »|PDF »