Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.

Site Tools

  • AAAS
  • Subscribe
  • Feedback

Site Search

Search Advanced

Science 11 May 2001:
Vol. 292. no. 5519, pp. 1115 - 1118
DOI: 10.1126/science.1058709

Viewpoint

Commensal Host-Bacterial Relationships in the Gut

Lora V. Hooper, Jeffrey I. Gordon*

One potential outcome of the adaptive coevolution of humans and bacteria is the development of commensal relationships, where neither partner is harmed, or symbiotic relationships, where unique metabolic traits or other benefits are provided. Our gastrointestinal tract is colonized by a vast community of symbionts and commensals that have important effects on immune function, nutrient processing, and a broad range of other host activities. The current genomic revolution offers an unprecedented opportunity to identify the molecular foundations of these relationships so that we can understand how they contribute to our normal physiology and how they can be exploited to develop new therapeutic strategies.

Department of Molecular Biology and Pharmacology, Washington University School of Medicine, St. Louis, MO 63110, USA.
*   To whom correspondence should be addressed. E-mail: jgordon{at}molecool.wustl.edu


Read the Full Text


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Cell-Cell Communication in Bacteria: United We Stand.
S. B. von Bodman, J. M. Willey, and S. P. Diggle (2008)
J. Bacteriol. 190, 4377-4391
   Full Text »    PDF »
From the Cover: Regulation of surface architecture by symbiotic bacteria mediates host colonization.
C. H. Liu, S. M. Lee, J. M. VanLare, D. L. Kasper, and S. K. Mazmanian (2008)
PNAS 105, 3951-3956
   Abstract »    Full Text »    PDF »
New ways of thinking about (and teaching about) intestinal epithelial function.
K. E. Barrett (2008)
Advan Physiol Educ 32, 25-34
   Abstract »    Full Text »    PDF »
Animal models of human pneumonia.
J. P. Mizgerd and S. J. Skerrett (2008)
Am J Physiol Lung Cell Mol Physiol 294, L387-L398
   Abstract »    Full Text »    PDF »
Homeostatic MyD88-dependent signals cause lethal inflamMation in the absence of A20.
E. E. Turer, R. M. Tavares, E. Mortier, O. Hitotsumatsu, R. Advincula, B. Lee, N. Shifrin, B. A. Malynn, and A. Ma (2008)
J. Exp. Med. 205, 451-464
   Abstract »    Full Text »    PDF »
Innate Immune Homeostasis by the Homeobox Gene Caudal and Commensal-Gut Mutualism in Drosophila.
J.-H. Ryu, S.-H. Kim, H.-Y. Lee, J. Y. Bai, Y.-D. Nam, J.-W. Bae, D. G. Lee, S. C. Shin, E.-M. Ha, and W.-J. Lee (2008)
Science 319, 777-782
   Abstract »    Full Text »    PDF »
NSAID-induced intestinal damage: are luminal bacteria the therapeutic target?.
C Scarpignato (2008)
Gut 57, 145-148
   Full Text »    PDF »
Sensing Gram-Negative Bacterial Lipopolysaccharides: a Human Disease Determinant?.
R. S. Munford (2008)
Infect. Immun. 76, 454-465
   Full Text »    PDF »
Translating symptoms into mechanisms: functional GI disorders.
S. M. Collins (2007)
Advan Physiol Educ 31, 329-331
   Abstract »    Full Text »    PDF »
Intestinal Integrity and Akkermansia muciniphila, a Mucin-Degrading Member of the Intestinal Microbiota Present in Infants, Adults, and the Elderly.
M. C. Collado, M. Derrien, E. Isolauri, W. M. de Vos, and S. Salminen (2007)
Appl. Envir. Microbiol. 73, 7767-7770
   Abstract »    Full Text »    PDF »
Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes.
K. Kurokawa, T. Itoh, T. Kuwahara, K. Oshima, H. Toh, A. Toyoda, H. Takami, H. Morita, V. K. Sharma, T. P. Srivastava, et al. (2007)
DNA Res
   Abstract »    Full Text »    PDF »
Bacteroides: the Good, the Bad, and the Nitty-Gritty.
H. M. Wexler (2007)
Clin. Microbiol. Rev. 20, 593-621
   Abstract »    Full Text »    PDF »
The impact of cell-bound antigen transport on mucosal tolerance induction.
O. Pabst, G. Bernhardt, and R. Forster (2007)
J. Leukoc. Biol. 82, 795-800
   Abstract »    Full Text »    PDF »
The Paneth Cell {alpha}-Defensin Deficiency of Ileal Crohn's Disease Is Linked to Wnt/Tcf-4.
J. Wehkamp, G. Wang, I. Kubler, S. Nuding, A. Gregorieff, A. Schnabel, R. J. Kays, K. Fellermann, O. Burk, M. Schwab, et al. (2007)
J. Immunol. 179, 3109-3118
   Abstract »    Full Text »    PDF »
Bugging of the Intestinal Mucosa.
C. Abraham and J. H. Cho (2007)
N. Engl. J. Med. 357, 708-710
   Full Text »    PDF »
Structural Basis of the Catalytic Reaction Mechanism of Novel 1,2-{alpha}-L-Fucosidase from Bifidobacterium bifidum.
M. Nagae, A. Tsuchiya, T. Katayama, K. Yamamoto, S. Wakatsuki, and R. Kato (2007)
J. Biol. Chem. 282, 18497-18509
   Abstract »    Full Text »    PDF »
Development of High-Throughput Phenotyping of Metagenomic Clones from the Human Gut Microbiome for Modulation of Eukaryotic Cell Growth.
K. Gloux, M. Leclerc, H. Iliozer, R. L'Haridon, C. Manichanh, G. Corthier, R. Nalin, H. M. Blottiere, and J. Dore (2007)
Appl. Envir. Microbiol. 73, 3734-3737
   Abstract »    Full Text »    PDF »
Bacteroides fragilis toxin stimulates intestinal epithelial cell shedding and {gamma}-secretase-dependent E-cadherin cleavage.
S. Wu, K.-J. Rhee, M. Zhang, A. Franco, and C. L. Sears (2007)
J. Cell Sci. 120, 1944-1952
   Abstract »    Full Text »    PDF »
Gingival Epithelial Cell Transcriptional Responses to Commensal and Opportunistic Oral Microbial Species.
Y. Hasegawa, J. J. Mans, S. Mao, M. C. Lopez, H. V. Baker, M. Handfield, and R. J. Lamont (2007)
Infect. Immun. 75, 2540-2547
   Abstract »    Full Text »    PDF »
Microbes and the Developing Gastrointestinal Tract.
J. Neu, M. Douglas-Escobar, and M. Lopez (2007)
Nutr Clin Pract 22, 174-182
   Abstract »    Full Text »    PDF »
Solitary Intestinal Lymphoid Tissue Provides a Productive Port of Entry for Salmonella enterica Serovar Typhimurium.
S. Halle, D. Bumann, H. Herbrand, Y. Willer, S. Dahne, R. Forster, and O. Pabst (2007)
Infect. Immun. 75, 1577-1585
   Abstract »    Full Text »    PDF »
The Nonantibiotic Anti-Inflammatory Effect of Antimicrobial Growth Promoters, the Real Mode of Action? A Hypothesis.
T. A. Niewold (2007)
Poult. Sci. 86, 605-609
   Abstract »    Full Text »    PDF »
TGF-beta Suppresses IFN-{gamma}-STAT1-Dependent Gene Transcription by Enhancing STAT1-PIAS1 Interactions in Epithelia but Not Monocytes/Macrophages.
C. Reardon and D. M. McKay (2007)
J. Immunol. 178, 4284-4295
   Abstract »    Full Text »    PDF »
Cross-Talk between Probiotic Bacteria and the Host Immune System.
B. Corthesy, H. R. Gaskins, and A. Mercenier (2007)
J. Nutr. 137, 781S-790S
   Abstract »    Full Text »    PDF »
Gastrointestinal development and meeting the nutritional needs of premature infants.
J. Neu (2007)
Am. J. Clinical Nutrition 85, 629S-634S
   Abstract »    Full Text »    PDF »
Molecular Analysis of the Subgingival Microbiota in Health and Disease.
R. G. Ledder, P. Gilbert, S. A. Huws, L. Aarons, M. P. Ashley, P. S. Hull, and A. J. McBain (2007)
Appl. Envir. Microbiol. 73, 516-523
   Abstract »    Full Text »    PDF »
Gut-associated bacterial microbiota in paediatric patients with inflammatory bowel disease.
M P Conte, S Schippa, I Zamboni, M Penta, F Chiarini, L Seganti, J Osborn, P Falconieri, O Borrelli, and S Cucchiara (2006)
Gut 55, 1760-1767
   Abstract »    Full Text »    PDF »
On the definition of a criterion of immunogenicity.
T. Pradeu and E. D. Carosella (2006)
PNAS 103, 17858-17861
   Abstract »    Full Text »    PDF »
Short-Chain Fatty Acids: Ready for Prime Time?.
C. C. Roy, C. L. Kien, L. Bouthillier, and E. Levy (2006)
Nutr Clin Pract 21, 351-366
   Abstract »    Full Text »    PDF »
Immunology of Crohn's disease..
H. BRAAT, M. P PEPPELENBOSCH, and D. W HOMMES (2006)
Ann. N.Y. Acad. Sci. 1072, 135-154
   Abstract »    Full Text »    PDF »
Toll-like receptor signaling and its relevance to intestinal inflammation..
E. CARIO and D. K PODOLSKY (2006)
Ann. N.Y. Acad. Sci. 1072, 332-338
   Abstract »    Full Text »    PDF »
Homeostatic Effects of TLR9 Signaling in Experimental Colitis..
J. LEE, D. RACHMILEWITZ, and E. RAZ (2006)
Ann. N.Y. Acad. Sci. 1072, 351-355
   Abstract »    Full Text »    PDF »
The QseC sensor kinase: A bacterial adrenergic receptor.
M. B. Clarke, D. T. Hughes, C. Zhu, E. C. Boedeker, and V. Sperandio (2006)
PNAS 103, 10420-10425
   Abstract »    Full Text »    PDF »
Prevalence of Bacteroides and Prevotella spp. in ulcerative colitis..
K. Lucke, S. Miehlke, E. Jacobs, and M. Schuppler (2006)
J. Med. Microbiol. 55, 617-624
   Abstract »    Full Text »    PDF »
The Front Line of Enteric Host Defense against Unwelcome Intrusion of Harmful Microorganisms: Mucins, Antimicrobial Peptides, and Microbiota.
V. Lievin-Le Moal and A. L. Servin (2006)
Clin. Microbiol. Rev. 19, 315-337
   Abstract »    Full Text »    PDF »
Differential cytokine response from dendritic cells to commensal and pathogenic bacteria in different lymphoid compartments in humans.
L. O'Mahony, L. O'Callaghan, J. McCarthy, D. Shilling, P. Scully, S. Sibartie, E. Kavanagh, W. O. Kirwan, H. P. Redmond, J. K. Collins, et al. (2006)
Am J Physiol Gastrointest Liver Physiol 290, G839-G845
   Abstract »    Full Text »    PDF »
Modulation of Neonatal Microbial Recognition: TLR-Mediated Innate Immune Responses Are Specifically and Differentially Modulated by Human Milk.
E. LeBouder, J. E. Rey-Nores, A.-C. Raby, M. Affolter, K. Vidal, C. A. Thornton, and M. O. Labeta (2006)
J. Immunol. 176, 3742-3752
   Abstract »    Full Text »    PDF »
Transepithelial Pathogen Uptake into the Small Intestinal Lamina Propria.
A. Vallon-Eberhard, L. Landsman, N. Yogev, B. Verrier, and S. Jung (2006)
J. Immunol. 176, 2465-2469
   Abstract »    Full Text »    PDF »
Layers of mutualism with commensal bacteria protect us from intestinal inflammation.
C Mueller and A J Macpherson (2006)
Gut 55, 276-284
   Full Text »    PDF »
Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach.
C Manichanh, L Rigottier-Gois, E Bonnaud, K Gloux, E Pelletier, L Frangeul, R Nalin, C Jarrin, P Chardon, P Marteau, et al. (2006)
Gut 55, 205-211
   Abstract »    Full Text »    PDF »
Comparative analysis of proteins with a mucus-binding domain found exclusively in lactic acid bacteria.
J. Boekhorst, Q. Helmer, M. Kleerebezem, and R. J. Siezen (2006)
Microbiology 152, 273-280
   Abstract »    Full Text »    PDF »
To DGC or not to DGC: oxygen guarding in the termite Zootermopsis nevadensis (Isoptera: Termopsidae).
J. R. B. Lighton and E. A. Ottesen (2005)
J. Exp. Biol. 208, 4671-4678
   Abstract »    Full Text »    PDF »
Identification and Molecular Cloning of a Novel Glycoside Hydrolase Family of Core 1 Type O-Glycan-specific Endo-{alpha}-N-acetylgalactosaminidase from Bifidobacterium longum.
K. Fujita, F. Oura, N. Nagamine, T. Katayama, J. Hiratake, K. Sakata, H. Kumagai, and K. Yamamoto (2005)
J. Biol. Chem. 280, 37415-37422
   Abstract »    Full Text »    PDF »
Effect of Lactobacillus GG on intestinal integrity in Malawian children at risk of tropical enteropathy.
L. Galpin, M. J Manary, K. Fleming, C.-N. Ou, P. Ashorn, and R. J Shulman (2005)
Am. J. Clinical Nutrition 82, 1040-1045
   Abstract »    Full Text »    PDF »
Cutting Edge: Bacterial Modulation of Epithelial Signaling via Changes in Neddylation of Cullin-1.
L. S. Collier-Hyams, V. Sloane, B. C. Batten, and A. S. Neish (2005)
J. Immunol. 175, 4194-4198
   Abstract »    Full Text »    PDF »
Metabonomic Identification of Two Distinct Phenotypes in Sprague-Dawley (Crl:CD(SD)) Rats.
L. C. Robosky, D. F. Wells, L. A. Egnash, M. L. Manning, M. D. Reily, and D. G. Robertson (2005)
Toxicol. Sci. 87, 277-284
   Abstract »    Full Text »    PDF »
From The Cover: Enhanced antiinflammatory capacity of a Lactobacillus plantarum mutant synthesizing modified teichoic acids.
C. Grangette, S. Nutten, E. Palumbo, S. Morath, C. Hermann, J. Dewulf, B. Pot, T. Hartung, P. Hols, and A. Mercenier (2005)
PNAS 102, 10321-10326
   Abstract »    Full Text »    PDF »
Diversity of the Human Intestinal Microbial Flora.
P. B. Eckburg, E. M. Bik, C. N. Bernstein, E. Purdom, L. Dethlefsen, M. Sargent, S. R. Gill, K. E. Nelson, and D. A. Relman (2005)
Science 308, 1635-1638
   Abstract »    Full Text »    PDF »
Host Distributions of Uncultivated Fecal Bacteroidales Bacteria Reveal Genetic Markers for Fecal Source Identification.
L. K. Dick, A. E. Bernhard, T. J. Brodeur, J. W. Santo Domingo, J. M. Simpson, S. P. Walters, and K. G. Field (2005)
Appl. Envir. Microbiol. 71, 3184-3191
   Abstract »    Full Text »    PDF »
Strain-Specific Effects of Probiotics on Gut Barrier Integrity following Hemorrhagic Shock.
M. D. Luyer, W. A. Buurman, M. Hadfoune, G. Speelmans, J. Knol, J. A. Jacobs, C. H. C. Dejong, A. J. M. Vriesema, and J. W. M. Greve (2005)
Infect. Immun. 73, 3686-3692
   Abstract »    Full Text »    PDF »
Events at the Host-Microbial Interface of the Gastrointestinal Tract III. Cell-to-cell signaling among microbial flora, host, and pathogens: there is a whole lot of talking going on.
M. B. Clarke and V. Sperandio (2005)
Am J Physiol Gastrointest Liver Physiol 288, G1105-G1109
   Abstract »    Full Text »    PDF »
Bacteroides massiliensis sp. nov., isolated from blood culture of a newborn.
L. Fenner, V. Roux, M.-N. Mallet, and D. Raoult (2005)
Int J Syst Evol Microbiol 55, 1335-1337
   Abstract »    Full Text »    PDF »
Green medicine.
O. Epstein (2005)
J R Soc Med 98, 203-205
   Full Text »    PDF »
Mouse Paneth Cell Secretory Responses to Cell Surface Glycolipids of Virulent and Attenuated Pathogenic Bacteria.
H. Tanabe, T. Ayabe, B. Bainbridge, T. Guina, R. K. Ernst, R. P. Darveau, S. I. Miller, and A. J. Ouellette (2005)
Infect. Immun. 73, 2312-2320
   Abstract »    Full Text »    PDF »
Compartmentalization of the Mucosal Immune Responses to Commensal Intestinal Bacteria.
A. J. MACPHERSON and T. UHR (2004)
Ann. N.Y. Acad. Sci. 1029, 36-43
   Abstract »    Full Text »    PDF »
Immune Regulation in the Intestine: A Balancing Act between Effector and Regulatory T Cell Responses.
F. POWRIE (2004)
Ann. N.Y. Acad. Sci. 1029, 132-141
   Abstract »    Full Text »    PDF »
Immune Response to Mycoplasma pulmonis in Nasal Mucosa Is Modulated by the Normal Microbiota.
G. Henriksson, L. Helgeland, T. Midtvedt, P. Stierna, and P. Brandtzaeg (2004)
Am. J. Respir. Cell Mol. Biol. 31, 657-662
   Abstract »    Full Text »    PDF »
Building an Intestine -- Architectural Contributions of Commensal Bacteria.
J. Madara (2004)
N. Engl. J. Med. 351, 1685-1686
   Full Text »    PDF »
Impact of commensal microbiota on murine gastrointestinal tract gene ontologies.
D. M. Mutch, R. Simmering, D. Donnicola, G. Fotopoulos, J. A. Holzwarth, G. Williamson, and I. Corthesy-Theulaz (2004)
Physiol Genomics 19, 22-31
   Abstract »    Full Text »    PDF »
Akkermansia muciniphila gen. nov., sp. nov., a human intestinal mucin-degrading bacterium.
M. Derrien, E. E. Vaughan, C. M. Plugge, and W. M. de Vos (2004)
Int J Syst Evol Microbiol 54, 1469-1476
   Abstract »    Full Text »    PDF »
Biodiversity of Vibrios.
F. L. Thompson, T. Iida, and J. Swings (2004)
Microbiol. Mol. Biol. Rev. 68, 403-431
   Abstract »    Full Text »    PDF »
Phages and the Evolution of Bacterial Pathogens: from Genomic Rearrangements to Lysogenic Conversion.
H. Brussow, C. Canchaya, and W.-D. Hardt (2004)
Microbiol. Mol. Biol. Rev. 68, 560-602
   Abstract »    Full Text »    PDF »
Probiotics and human health: a clinical perspective.
H S Gill and F Guarner (2004)
Postgrad. Med. J. 80, 516-526
   Abstract »    Full Text »    PDF »
Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice.
N. Sudo, Y. Chida, Y. Aiba, J. Sonoda, N. Oyama, X.-N. Yu, C. Kubo, and Y. Koga (2004)
J. Physiol. 558, 263-275
   Abstract »    Full Text »    PDF »
Spatial Distribution and Stability of the Eight Microbial Species of the Altered Schaedler Flora in the Mouse Gastrointestinal Tract.
R. B. Sarma-Rupavtarm, Z. Ge, D. B. Schauer, J. G. Fox, and M. F. Polz (2004)
Appl. Envir. Microbiol. 70, 2791-2800
   Abstract »    Full Text »    PDF »
Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease.
S J Ott, M Musfeldt, D F Wenderoth, J Hampe, O Brant, U R Folsch, K N Timmis, and S Schreiber (2004)
Gut 53, 685-693
   Abstract »    Full Text »    PDF »
Functional modulation of enterocytes by gram-positive and gram-negative microorganisms.
J.-M. Otte and D. K. Podolsky (2004)
Am J Physiol Gastrointest Liver Physiol 286, G613-G626
   Abstract »    Full Text »    PDF »
Ablation of the Tamm-Horsfall protein gene increases susceptibility of mice to bladder colonization by type 1-fimbriated Escherichia coli.
L. Mo, X.-H. Zhu, H.-Y. Huang, E. Shapiro, D. L. Hasty, and X.-R. Wu (2004)
Am J Physiol Renal Physiol 286, F795-F802
   Abstract »    Full Text »    PDF »
Symbiont-Induced Changes in Host Actin during the Onset of a Beneficial Animal-Bacterial Association.
J. R. Kimbell and M. J. McFall-Ngai (2004)
Appl. Envir. Microbiol. 70, 1434-1441
   Abstract »    Full Text »    PDF »
The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533.
R. D. Pridmore, B. Berger, F. Desiere, D. Vilanova, C. Barretto, A.-C. Pittet, M.-C. Zwahlen, M. Rouvet, E. Altermann, R. Barrangou, et al. (2004)
PNAS 101, 2512-2517
   Abstract »    Full Text »    PDF »
Aberrant expansion of segmented filamentous bacteria in IgA-deficient gut.
K. Suzuki, B. Meek, Y. Doi, M. Muramatsu, T. Chiba, T. Honjo, and S. Fagarasan (2004)
PNAS 101, 1981-1986
   Abstract »    Full Text »    PDF »
Diversity of Bacteria Associated with Natural Aphid Populations.
S. Haynes, A. C. Darby, T. J. Daniell, G. Webster, F. J. F. van Veen, H.C.J. Godfray, J. I. Prosser, and A. E. Douglas (2003)
Appl. Envir. Microbiol. 69, 7216-7223
   Abstract »    Full Text »    PDF »
Evidence of Regio-specific Glycosylation in Human Intestinal Mucins: PRESENCE OF AN ACIDIC GRADIENT ALONG THE INTESTINAL TRACT.
C. Robbe, C. Capon, E. Maes, M. Rousset, A. Zweibaum, J.-P. Zanetta, and J.-C. Michalski (2003)
J. Biol. Chem. 278, 46337-46348
   Abstract »    Full Text »    PDF »
Plasticity of Repetitive DNA Sequences within a Bacterial (Type IV) Secretion System Component.
R. A. Aras, W. Fischer, G. I. Perez-Perez, M. Crosatti, T. Ando, R. Haas, and M. J. Blaser (2003)
J. Exp. Med. 198, 1349-1360
   Abstract »    Full Text »    PDF »
Comparative Genomics of Insect-Symbiotic Bacteria: Influence of Host Environment on Microbial Genome Composition.
R. V. M. Rio, C. Lefevre, A. Heddi, and S. Aksoy (2003)
Appl. Envir. Microbiol. 69, 6825-6832
   Abstract »    Full Text »    PDF »
The intestine and its microflora are partners for the protection of the host: report on the Danone Symposium "The Intelligent Intestine," held in Paris, June 14, 2002.
P. Bourlioux, B. Koletzko, F. Guarner, and V. Braesco (2003)
Am. J. Clinical Nutrition 78, 675-683
   Abstract »    Full Text »    PDF »
Role of passive and adaptive immunity in influencing enterocyte-specific gene expression.
S. L. Jenkins, J. Wang, M. Vazir, J. Vela, O. Sahagun, P. Gabbay, L. Hoang, R. L. Diaz, R. Aranda, and M. G. Martin (2003)
Am J Physiol Gastrointest Liver Physiol 285, G714-G725
   Abstract »    Full Text »    PDF »
Elucidation of the Transmission Patterns of an Insect-Borne Bacterium.
A. C. Darby and A. E. Douglas (2003)
Appl. Envir. Microbiol. 69, 4403-4407
   Abstract »    Full Text »    PDF »
Bacteria-host communication: The language of hormones.
V. Sperandio, A. G. Torres, B. Jarvis, J. P. Nataro, and J. B. Kaper (2003)
PNAS 100, 8951-8956
   Abstract »    Full Text »    PDF »
Prophage Genomics.
C. Canchaya, C. Proux, G. Fournous, A. Bruttin, and H. Brussow (2003)
Microbiol. Mol. Biol. Rev. 67, 238-276
   Abstract »    Full Text »    PDF »
A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis.
J. Xu, M. K. Bjursell, J. Himrod, S. Deng, L. K. Carmichael, H. C. Chiang, L. V. Hooper, and J. I. Gordon (2003)
Science 299, 2074-2076
   Abstract »    Full Text »    PDF »
Culture-Independent Molecular Analysis of Microbial Constituents of the Healthy Human Outer Ear.
D. N. Frank, G. B. Spiegelman, W. Davis, E. Wagner, E. Lyons, and N. R. Pace (2003)
J. Clin. Microbiol. 41, 295-303
   Abstract »    Full Text »    PDF »
Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells.
T. S. Stappenbeck, L. V. Hooper, and J. I. Gordon (2002)
PNAS 99, 15451-15455
   Abstract »    Full Text »    PDF »
Critical Roles of Activation-Induced Cytidine Deaminase in the Homeostasis of Gut Flora.
S. Fagarasan, M. Muramatsu, K. Suzuki, H. Nagaoka, H. Hiai, and T. Honjo (2002)
Science 298, 1424-1427
   Abstract »    Full Text »    PDF »
The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.
M. A. Schell, M. Karmirantzou, B. Snel, D. Vilanova, B. Berger, G. Pessi, M.-C. Zwahlen, F. Desiere, P. Bork, M. Delley, et al. (2002)
PNAS 99, 14422-14427
   Abstract »    Full Text »    PDF »
Public Health Considerations in Human Consumption of Wild Game.
A. S. AHL, D. NGANWA, and S. WILSON (2002)
Ann. N.Y. Acad. Sci. 969, 48-50
   Abstract »    Full Text »    PDF »
A Gnotobiotic Transgenic Mouse Model for Studying Interactions between Small Intestinal Enterocytes and Intraepithelial Lymphocytes.
I. U. Mysorekar, R. G. Lorenz, and J. I. Gordon (2002)
J. Biol. Chem. 277, 37811-37819
   Abstract »    Full Text »    PDF »
Fluorescent Amplified Fragment Length Polymorphism and Repetitive Extragenic Palindrome-PCR Fingerprinting Reveal Host-Specific Genetic Diversity of Vibrio halioticoli-Like Strains Isolated from the Gut of Japanese Abalone.
T. Sawabe, F. L. Thompson, J. Heyrman, M. Cnockaert, K. Hayashi, R. Tanaka, M. Yoshimizu, B. Hoste, J. Swings, and Y. Ezura (2002)
Appl. Envir. Microbiol. 68, 4140-4144
   Abstract »    Full Text »    PDF »
Extensive Profiling of a Complex Microbial Community by High-Throughput Sequencing.
J. E. Hill, R. P. Seipp, M. Betts, L. Hawkins, A. G. Van Kessel, W. L. Crosby, and S. M. Hemmingsen (2002)
Appl. Envir. Microbiol. 68, 3055-3066
   Abstract »