Related Content
Search Google Scholar for:
More Information
Related Jobs from ScienceCareers
|
|
Science 15 September 2000: Vol. 289. no. 5486, pp. 1928 - 1930 DOI: 10.1126/science.289.5486.1928
|
|
Reports
A Link Between RNA Interference and Nonsense-Mediated Decay in Caenorhabditis elegans
Mary Ellen Domeier,1
Daniel P. Morse,2
Scott W. Knight,2
Michael Portereiko,1
Brenda L. Bass,2
Susan E. Mango1*
Double-stranded RNA (dsRNA) inhibits expression of
homologous genes by a process involving messenger RNA degradation. To
gain insight into the mechanism of degradation, we examined how RNA interference is affected by mutations in the smg genes,
which are required for nonsense-mediated decay. For three of six
smg genes tested, mutations resulted in animals that were
initially silenced by dsRNA but then recovered; wild-type animals
remained silenced. The levels of target messenger RNAs were restored
during recovery, and RNA editing and degradation of the dsRNA were
identical to those of the wild type. We suggest that persistence of RNA interference relies on a subset of smg genes.
1 Huntsman Cancer Institute Center for Children
and Department of Oncological Sciences, University of Utah, Salt Lake
City, UT 84112, USA.
2 Department of Biochemistry
and Howard Hughes Medical Institute, University of Utah, Salt Lake
City, UT 84132, USA.
*
To whom correspondence should be addressed. E-mail:
susan.mango{at}hci.utah.edu
Read the Full Text
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- The Caenorhabditis elegans rsd-2 and rsd-6 Genes Are Required for Chromosome Functions During Exposure to Unfavorable Environments.
- W. Han, P. Sundaram, H. Kenjale, J. Grantham, and L. Timmons (2008)
Genetics
178, 1875-1893
| Abstract »
| Full Text »
| PDF »
- A Cluster of Disease Resistance Genes in Arabidopsis Is Coordinately Regulated by Transcriptional Activation and RNA Silencing.
- H. Yi and E. J. Richards (2007)
PLANT CELL
19, 2929-2939
| Abstract »
| Full Text »
| PDF »
- Transcriptional Silencing of Nonsense Codon-containing Immunoglobulin {micro} Genes Requires Translation of Its mRNA.
- L. Stalder and O. Muhlemann (2007)
J. Biol. Chem.
282, 16079-16085
| Abstract »
| Full Text »
| PDF »
- Mechanistic insights and identification of two novel factors in the C. elegans NMD pathway.
- D. Longman, R. H.A. Plasterk, I. L. Johnstone, and J. F. Caceres (2007)
Genes & Dev.
21, 1075-1085
| Abstract »
| Full Text »
| PDF »
- Both introns and long 3'-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants.
- S. Kertesz, Z. Kerenyi, Z. Merai, I. Bartos, T. Palfy, E. Barta, and D. Silhavy (2006)
Nucleic Acids Res.
34, 6147-6157
| Abstract »
| Full Text »
| PDF »
- A Differential Cytolocalization Assay for Analysis of Macromolecular Assemblies in the Eukaryotic Cytoplasm.
- D. Blanchard, H. Hutter, J. Fleenor, and A. Fire (2006)
Mol. Cell. Proteomics
5, 2175-2184
| Abstract »
| Full Text »
| PDF »
- Inaugural Article: Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis.
- A. J. Herr, A. Molnar, A. Jones, and D. C. Baulcombe (2006)
PNAS
103, 14994-15001
| Abstract »
| Full Text »
| PDF »
- Crystal structure of the UPF2-interacting domain of nonsense-mediated mRNA decay factor UPF1.
- J. Kadlec, D. Guilligay, R. B. Ravelli, and S. Cusack (2006)
RNA
12, 1817-1824
| Abstract »
| Full Text »
| PDF »
- ATP-binding Cassette Transporters Are Required for Efficient RNA Interference in Caenorhabditis elegans.
- P. Sundaram, B. Echalier, W. Han, D. Hull, and L. Timmons (2006)
Mol. Biol. Cell
17, 3678-3688
| Abstract »
| Full Text »
| PDF »
- Arabidopsis UPF1 RNA Helicase for Nonsense-mediated mRNA Decay is Involved in Seed Size Control and is Essential for Growth.
- M. Yoine, T. Nishii, and K. Nakamura (2006)
Plant Cell Physiol.
47, 572-580
| Abstract »
| Full Text »
| PDF »
- A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing.
- J. REHWINKEL, I. BEHM-ANSMANT, D. GATFIELD, and E. IZAURRALDE (2005)
RNA
11, 1640-1647
| Abstract »
| Full Text »
| PDF »
- Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets.
- J. REHWINKEL, I. LETUNIC, J. RAES, P. BORK, and E. IZAURRALDE (2005)
RNA
11, 1530-1544
| Abstract »
| Full Text »
| PDF »
- Functional Genomic Analysis of RNA Interference in C. elegans.
- J. K. Kim, H. W. Gabel, R. S. Kamath, M. Tewari, A. Pasquinelli, J.-F. Rual, S. Kennedy, M. Dybbs, N. Bertin, J. M. Kaplan, et al. (2005)
Science
308, 1164-1167
| Abstract »
| Full Text »
| PDF »
- Transcriptional silencing of a transgene by RNAi in the soma of C. elegans.
- A. Grishok, J. L. Sinskey, and P. A. Sharp (2005)
Genes & Dev.
19, 683-696
| Abstract »
| Full Text »
| PDF »
- RNA interference: from model organisms towards therapy for neural and neuromuscular disorders.
- S. D. Buckingham, B. Esmaeili, M. Wood, and D. B. Sattelle (2004)
Hum. Mol. Genet.
13, R275-R288
| Abstract »
| Full Text »
| PDF »
- Effects of Length and Location on the Cellular Response to Double-Stranded RNA.
- Q. Wang and G. G. Carmichael (2004)
Microbiol. Mol. Biol. Rev.
68, 432-452
| Abstract »
| Full Text »
| PDF »
- RNA-Mediated Programming of Developmental Genome Rearrangements in Paramecium tetraurelia.
- O. Garnier, V. Serrano, S. Duharcourt, and E. Meyer (2004)
Mol. Cell. Biol.
24, 7370-7379
| Abstract »
| Full Text »
| PDF »
- RNA Interference: Biology, Mechanism, and Applications.
- N. Agrawal, P. V. N. Dasaradhi, A. Mohmmed, P. Malhotra, R. K. Bhatnagar, and S. K. Mukherjee (2003)
Microbiol. Mol. Biol. Rev.
67, 657-685
| Abstract »
| Full Text »
| PDF »
- RNA Interference in Biology and Medicine.
- O. Milhavet, D. S. Gary, and M. P. Mattson (2003)
Pharmacol. Rev.
55, 629-648
| Abstract »
| Full Text »
| PDF »
- A Hox gene mutation that triggers nonsense-mediated RNA decay and affects alternative splicing during Drosophila development.
- C. R. Alonso and M. Akam (2003)
Nucleic Acids Res.
31, 3873-3880
| Abstract »
| Full Text »
| PDF »
- Gene silencing in Caenorhabditis elegans by transitive RNA interference.
- M. N. ALDER, S. DAMES, J. GAUDET, and S. E. MANGO (2003)
RNA
9, 25-32
| Abstract »
| Full Text »
| PDF »
- Inhibition of HIV-1 Infection by Small Interfering RNA-Mediated RNA Interference.
- J. Capodici, K. Kariko, and D. Weissman (2002)
J. Immunol.
169, 5196-5201
| Abstract »
| Full Text »
| PDF »
- Elovl1 and p55Cdc Genes Are Localized in a Tail-to-Tail Array and Are Co-expressed in Proliferating Cells.
- A. Asadi, J. Jorgensen, and A. Jacobsson (2002)
J. Biol. Chem.
277, 18494-18500
| Abstract »
| Full Text »
| PDF »
- RNA Silencing and the Mobile Silencing Signal.
- S. Mlotshwa, O. Voinnet, M. F. Mette, M. Matzke, H. Vaucheret, S. W. Ding, G. Pruss, and V. B. Vance (2002)
PLANT CELL
14, S289-301
| Full Text »
| PDF »
- Using RNA interference to identify genes required for RNA interference.
- N. R. Dudley, J.-C. Labbe, and B. Goldstein (2002)
PNAS
99, 4191-4196
| Abstract »
| Full Text »
| PDF »
- Comparative genomics and evolution of proteins involved in RNA metabolism.
- V. Anantharaman, E. V. Koonin, and L. Aravind (2002)
Nucleic Acids Res.
30, 1427-1464
| Abstract »
| Full Text »
| PDF »
- Short Defective Interfering RNAs of Tombusviruses Are Not Targeted but Trigger Post-Transcriptional Gene Silencing against Their Helper Virus.
- G. Szittya, A. Molnar, D. Silhavy, C. Hornyik, and J. Burgyan (2002)
PLANT CELL
14, 359-372
| Abstract »
| Full Text »
| PDF »
- RNA Helicase MUT-14-Dependent Gene Silencing Triggered in C. elegans by Short Antisense RNAs.
- M. Tijsterman, R. F. Ketting, K. L. Okihara, T. Sijen, and R. H. A. Plasterk (2002)
Science
295, 694-697
| Abstract »
| Full Text »
| PDF »
- Transgene-mediated post-transcriptional gene silencing is inhibited by 3' non-coding sequences in Paramecium.
- A. Galvani and L. Sperling (2001)
Nucleic Acids Res.
29, 4387-4394
| Abstract »
| Full Text »
| PDF »
- Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems.
- N. J. Caplen, S. Parrish, F. Imani, A. Fire, and R. A. Morgan (2001)
PNAS
| Abstract »
| Full Text »
| PDF »
- RNA Silencing in Plants--Defense and Counterdefense.
- V. Vance and H. Vaucheret (2001)
Science
292, 2277-2280
| Abstract »
| Full Text »
| PDF »
- Programmed Cell Death in the Ovary: Insights and Future Prospects Using Genetic Technologies.
- J. K. Pru and J. L. Tilly (2001)
Mol. Endocrinol.
15, 845-853
| Abstract »
| Full Text »
| PDF »
- RNA interference{---}2001.
- P. A. Sharp (2001)
Genes & Dev.
15, 485-490
| Full Text »
- HC-Pro Suppression of Transgene Silencing Eliminates the Small RNAs but Not Transgene Methylation or the Mobile Signal.
- A. C. Mallory, L. Ely, T. H. Smith, R. Marathe, R. Anandalakshmi, M. Fagard, H. Vaucheret, G. Pruss, L. Bowman, and V. B. Vance (2001)
PLANT CELL
13, 571-583
| Abstract »
| Full Text »
- Nonsense-Mediated Decay of Mutant waxy mRNA in Rice.
- M. Isshiki, Y. Yamamoto, H. Satoh, and K. Shimamoto (2001)
Plant Physiology
125, 1388-1395
| Abstract »
| Full Text »
- Post-transcriptional gene silencing in plants.
- H. Vaucheret, C. Beclin, and M. Fagard (2001)
J. Cell Sci.
114, 3083-3091
| Abstract »
| Full Text »
| PDF »
- Nonsense-mediated mRNA Decay in Saccharomyces cerevisiae: A Quality Control Mechanism That Degrades Transcripts Harboring Premature Termination Codons.
- C.I. GONZALEZ, W. WANG, and S.W. PELTZ (2001)
Cold Spring Harb Symp Quant Biol
66, 321-328
| Abstract »
| PDF »
- Using RNA interference to identify genes required for RNA interference.
- N. R. Dudley, J.-C. Labbe, and B. Goldstein (2002)
PNAS
99, 4191-4196
| Abstract »
| Full Text »
| PDF »
- Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems.
- N. J. Caplen, S. Parrish, F. Imani, A. Fire, and R. A. Morgan (2001)
PNAS
98, 9742-9747
| Abstract »
| Full Text »
| PDF »
- Fertile Hypomorphic ARGONAUTE (ago1) Mutants Impaired in Post-Transcriptional Gene Silencing and Virus Resistance.
- J.-B. Morel, C. Godon, P. Mourrain, C. Beclin, S. Boutet, F. Feuerbach, F. Proux, and H. Vaucheret (2002)
PLANT CELL
14, 629-639
| Abstract »
| Full Text »
| PDF »
|
|