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Science 4 August 2000:
Vol. 289. no. 5480, pp. 739 - 745
DOI: 10.1126/science.289.5480.739

Research Articles

Crystal Structure of Rhodopsin: A G Protein-Coupled Receptor

Krzysztof Palczewski,123* Takashi Kumasaka,7 Tetsuya Hori,78 Craig A. Behnke,46 Hiroyuki Motoshima,7 Brian A. Fox,46 Isolde Le Trong,56 David C. Teller,46 Tetsuji Okada,1 Ronald E. Stenkamp,56* Masaki Yamamoto,7 Masashi Miyano7*

Heterotrimeric guanine nucleotide-binding protein (G protein)-coupled receptors (GPCRs) respond to a variety of different external stimuli and activate G proteins. GPCRs share many structural features, including a bundle of seven transmembrane alpha  helices connected by six loops of varying lengths. We determined the structure of rhodopsin from diffraction data extending to 2.8 angstroms resolution. The highly organized structure in the extracellular region, including a conserved disulfide bridge, forms a basis for the arrangement of the seven-helix transmembrane motif. The ground-state chromophore, 11-cis-retinal, holds the transmembrane region of the protein in the inactive conformation. Interactions of the chromophore with a cluster of key residues determine the wavelength of the maximum absorption. Changes in these interactions among rhodopsins facilitate color discrimination. Identification of a set of residues that mediate interactions between the transmembrane helices and the cytoplasmic surface, where G-protein activation occurs, also suggests a possible structural change upon photoactivation.

1 Department of Ophthalmology,
2 Department of Pharmacology,
3 Department of Chemistry,
4 Department of Biochemistry,
5 Department of Biological Structure, and
6 Biomolecular Structure Center, University of Washington, Seattle, WA 98195, USA.
7 Structural Biophysics Laboratory, RIKEN Harima Institute, 1-1-1 Kouto, Mikazuki-cho, Sayo-gun, Hyogo 679-5148, Japan.
8 Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8501, Japan
*   To whom correspondence should be addressed. E-mail: miyano{at}spring8.or.jp (M.M.); palczews{at}u.washington.edu (K.P.); stenkamp{at}u.washington.edu (R.E.S.).


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Allosteric Ligands for the Corticotropin Releasing Factor Type 1 Receptor Modulate Conformational States Involved in Receptor Activation.
S. R. J. Hoare, B. A. Fleck, R. S. Gross, P. D. Crowe, J. P. Williams, and D. E. Grigoriadis (2008)
Mol. Pharmacol. 73, 1371-1380
   Abstract »    Full Text »    PDF »
Acceleration of Cardiovascular Disease by a Dysfunctional Prostacyclin Receptor Mutation: Potential Implications for Cyclooxygenase-2 Inhibition.
E. Arehart, J. Stitham, F. W. Asselbergs, K. Douville, T. MacKenzie, K. M. Fetalvero, S. Gleim, Z. Kasza, Y. Rao, L. Martel, et al. (2008)
Circ. Res. 102, 986-993
   Abstract »    Full Text »    PDF »
Post-activation-mediated Changes in Opioid Receptors Detected by N-terminal Antibodies.
A. Gupta, R. Rozenfeld, I. Gomes, K. M. Raehal, F. M. Decaillot, L. M. Bohn, and L. A. Devi (2008)
J. Biol. Chem. 283, 10735-10744
   Abstract »    Full Text »    PDF »
Multiple Roles for the C-terminal Tail of the Chemokine Scavenger D6.
C. V. McCulloch, V. Morrow, S. Milasta, I. Comerford, G. Milligan, G. J. Graham, N. W. Isaacs, and R. J. B. Nibbs (2008)
J. Biol. Chem. 283, 7972-7982
   Abstract »    Full Text »    PDF »
Dimerization and oligomerization of G-protein-coupled receptors: debated structures with established and emerging functions.
L. Szidonya, M. Cserzo, and L. Hunyady (2008)
J. Endocrinol. 196, 435-453
   Abstract »    Full Text »    PDF »
Vertebrate Membrane Proteins: Structure, Function, and Insights from Biophysical Approaches.
D. J. Muller, N. Wu, and K. Palczewski (2008)
Pharmacol. Rev. 60, 43-78
   Abstract »    Full Text »    PDF »
An Intracellular Allosteric Site for a Specific Class of Antagonists of the CC Chemokine G Protein-Coupled Receptors CCR4 and CCR5.
G. Andrews, C. Jones, and K. A. Wreggett (2008)
Mol. Pharmacol. 73, 855-867
   Abstract »    Full Text »    PDF »
Rhodopsin and 9-Demethyl-retinal Analog: EFFECT OF A PARTIAL AGONIST ON DISPLACEMENT OF TRANSMEMBRANE HELIX 6 IN CLASS A G PROTEIN-COUPLED RECEPTORS.
B. Knierim, K. P. Hofmann, W. Gartner, W. L. Hubbell, and O. P. Ernst (2008)
J. Biol. Chem. 283, 4967-4974
   Abstract »    Full Text »    PDF »
Efficient Coupling of Transducin to Monomeric Rhodopsin in a Phospholipid Bilayer.
M. R. Whorton, B. Jastrzebska, P. S.-H. Park, D. Fotiadis, A. Engel, K. Palczewski, and R. K. Sunahara (2008)
J. Biol. Chem. 283, 4387-4394
   Abstract »    Full Text »    PDF »
Characterization of G-Protein Coupled Receptor Kinase Interaction with the Neurokinin-1 Receptor Using Bioluminescence Resonance Energy Transfer.
R. Jorgensen, N. D. Holliday, J. L. Hansen, M. Vrecl, A. Heding, T. W. Schwartz, and C. E. Elling (2008)
Mol. Pharmacol. 73, 349-358
   Abstract »    Full Text »    PDF »
[3H]Org 43553, the First Low-Molecular-Weight Agonistic and Allosteric Radioligand for the Human Luteinizing Hormone Receptor.
L. H. Heitman, J. Oosterom, K. M. Bonger, C. M. Timmers, P. H. G. Wiegerinck, and A. P. IJzerman (2008)
Mol. Pharmacol. 73, 518-524
   Abstract »    Full Text »    PDF »
Conformational thermostabilization of the {beta}1-adrenergic receptor in a detergent-resistant form.
M. J. Serrano-Vega, F. Magnani, Y. Shibata, and C. G. Tate (2008)
PNAS 105, 877-882
   Abstract »    Full Text »    PDF »
Site-specific Incorporation of Keto Amino Acids into Functional G Protein-coupled Receptors Using Unnatural Amino Acid Mutagenesis.
S. Ye, C. Kohrer, T. Huber, M. Kazmi, P. Sachdev, E. C.Y. Yan, A. Bhagat, U. L. RajBhandary, and T. P. Sakmar (2008)
J. Biol. Chem. 283, 1525-1533
   Abstract »    Full Text »    PDF »
Expression of a Functional G Protein-Coupled Receptor 54-Kisspeptin Autoregulatory System in Hypothalamic Gonadotropin-Releasing Hormone Neurons.
S. Quaynor, L. Hu, P. K. Leung, H. Feng, N. Mores, L. Z. Krsmanovic, and K. J. Catt (2007)
Mol. Endocrinol. 21, 3062-3070
   Abstract »    Full Text »    PDF »
Roof and Floor of the Muscarinic Binding Pocket: Variations in the Binding Modes of Orthosteric Ligands.
J. A. Goodwin, E. C. Hulme, C. J. Langmead, and B. G. Tehan (2007)
Mol. Pharmacol. 72, 1484-1496
   Abstract »    Full Text »    PDF »
High-Resolution Crystal Structure of an Engineered Human 2-Adrenergic G Protein Coupled Receptor.
V. Cherezov, D. M. Rosenbaum, M. A. Hanson, S. G. F. Rasmussen, F. S. Thian, T. S. Kobilka, H.-J. Choi, P. Kuhn, W. I. Weis, B. K. Kobilka, et al. (2007)
Science 318, 1258-1265
   Abstract »    Full Text »    PDF »
Isolation and characterization of melanopsin (Opn4) from the Australian marsupial Sminthopsis crassicaudata (fat-tailed dunnart).
S. S Pires, J. Shand, J. Bellingham, C. Arrese, M. Turton, S. Peirson, R. G Foster, and S. Halford (2007)
Proc R Soc B 274, 2791-2799
   Abstract »    Full Text »    PDF »
Functional Analysis of Transmembrane Domain 2 of the M1 Muscarinic Acetylcholine Receptor.
M. S. Bee and E. C. Hulme (2007)
J. Biol. Chem. 282, 32471-32479
   Abstract »    Full Text »    PDF »
Inhibitory role of CXCR4 glycan in CD4-independent X4-tropic human immunodeficiency virus type 1 infection and its abrogation in CD4-dependent infection.
Y. Kubo, M. Yokoyama, H. Yoshii, C. Mitani, C. Tominaga, Y. Tanaka, H. Sato, and N. Yamamoto (2007)
J. Gen. Virol. 88, 3139-3144
   Abstract »    Full Text »    PDF »
Assessment of the Roles of Serines 5.43(239) and 5.46(242) for Binding and Potency of Agonist Ligands at the Human Serotonin 5-HT2A Receptor.
M. R. Braden and D. E. Nichols (2007)
Mol. Pharmacol. 72, 1200-1209
   Abstract »    Full Text »    PDF »
Transmembrane Segment IV Contributes a Functionally Important Interface for Oligomerization of the Class II G Protein-coupled Secretin Receptor.
K. G. Harikumar, D. I. Pinon, and L. J. Miller (2007)
J. Biol. Chem. 282, 30363-30372
   Abstract »    Full Text »    PDF »



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