Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.


Science 23 April 1999:
Vol. 284. no. 5414, pp. 644 - 647
DOI: 10.1126/science.284.5414.644

Reports

A Role for DNA-PK in Retroviral DNA Integration

René Daniel, Richard A. Katz, Anna Marie Skalka *

Retroviral DNA integration is catalyzed by the viral protein integrase. Here, it is shown that DNA-dependent protein kinase (DNA-PK), a host cell protein, also participates in the reaction. DNA-PK-deficient murine scid cells infected with three different retroviruses showed a substantial reduction in retroviral DNA integration and died by apoptosis. Scid cell killing was not observed after infection with an integrase-defective virus, suggesting that abortive integration is the trigger for death in these DNA repair-deficient cells. These results suggest that the initial events in retroviral integration are detected as DNA damage by the host cell and that completion of the integration process requires the DNA-PK-mediated repair pathway.

Institute for Cancer Research, Fox Chase Cancer Center, 7701 Burholme Avenue, Philadelphia, PA 19111, USA.
*   To whom correspondence should be addressed. E-mail: AM_Skalka{at}fccc.edu


Read the Full Text


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Activation of the DNA-dependent Protein Kinase Stimulates Nuclear Export of the Androgen Receptor in Vitro.
L. C. Shank, J. B. Kelley, D. Gioeli, C.-S. Yang, A. Spencer, L. A. Allison, and B. M. Paschal (2008)
J. Biol. Chem. 283, 10568-10580
   Abstract »    Full Text »    PDF »
Ku80 Participates in the Targeting of Retroviral Transgenes to the Chromatin of CHO Cells.
C. Masson, S. Bury-Mone, E. Guiot, A. Saez-Cirion, D. Schoevaert-Brossault, C. Brachet-Ducos, O. Delelis, F. Subra, L. Jeanson-Leh, and J.-F. Mouscadet (2007)
J. Virol. 81, 7924-7932
   Abstract »    Full Text »    PDF »
Quantitative Analysis of Human Immunodeficiency Virus Type 1-Infected CD4+ Cell Proteome: Dysregulated Cell Cycle Progression and Nuclear Transport Coincide with Robust Virus Production.
E. Y. Chan, W.-J. Qian, D. L. Diamond, T. Liu, M. A. Gritsenko, M. E. Monroe, D. G. Camp II, R. D. Smith, and M. G. Katze (2007)
J. Virol. 81, 7571-7583
   Abstract »    Full Text »    PDF »
Host Factors That Control Long Terminal Repeat Retrotransposons in Saccharomyces cerevisiae: Implications for Regulation of Mammalian Retroviruses.
P. H. Maxwell and M. J. Curcio (2007)
Eukaryot. Cell 6, 1069-1080
   Full Text »    PDF »
Chromosomal integration of LTR-flanked DNA in yeast expressing HIV-1 integrase: down regulation by RAD51.
S. Desfarges, J. San Filippo, M. Fournier, C. Calmels, A. Caumont-Sarcos, S. Litvak, P. Sung, and V. Parissi (2006)
Nucleic Acids Res. 34, 6215-6224
   Abstract »    Full Text »    PDF »
Eukaryotic Transposable Elements and Genome Evolution Special Feature: Positive selection of yeast nonhomologous end-joining genes and a retrotransposon conflict hypothesis.
S. L. Sawyer and H. S. Malik (2006)
PNAS 103, 17614-17619
   Abstract »    Full Text »    PDF »
Contribution of vpu, env, and nef to CD4 down-modulation and resistance of human immunodeficiency virus type 1-infected T cells to superinfection..
S. Wildum, M. Schindler, J. Munch, and F. Kirchhoff (2006)
J. Virol. 80, 8047-8059
   Abstract »    Full Text »    PDF »
Linkage of Reduced Receptor Affinity and Superinfection to Pathogenesis of TR1.3 Murine Leukemia Virus.
S. L. Murphy, M. Chung-Landers, M. Honczarenko, and G. N. Gaulton (2006)
J. Virol. 80, 4601-4609
   Abstract »    Full Text »    PDF »
The DNA repair genes XPB and XPD defend cells from retroviral infection.
K. Yoder, A. Sarasin, K. Kraemer, M. McIlhatton, F. Bushman, and R. Fishel (2006)
PNAS 103, 4622-4627
   Abstract »    Full Text »    PDF »
Evolution of Broad Host Range in Retroviruses Leads to Cell Death Mediated by Highly Cytopathic Variants.
G. J. A. Rainey and J. M. Coffin (2006)
J. Virol. 80, 562-570
   Abstract »    Full Text »    PDF »
Preliminary Mapping of a Putative Inhibitor-Binding Pocket for Human Immunodeficiency Virus Type 1 Integrase Inhibitors.
D. J. Lee and W. E. Robinson Jr. (2006)
Antimicrob. Agents Chemother. 50, 134-142
   Abstract »    Full Text »    PDF »
Avian Sarcoma and Leukosis Virus Cytopathic Effect in the Absence of TVB Death Domain Signaling.
S. Klucking, A. S. Collins, and J. A. T. Young (2005)
J. Virol. 79, 8243-8248
   Abstract »    Full Text »    PDF »
Retroviruses and yeast retrotransposons use overlapping sets of host genes.
B. Irwin, M. Aye, P. Baldi, N. Beliakova-Bethell, H. Cheng, Y. Dou, W. Liou, and S. Sandmeyer (2005)
Genome Res. 15, 641-654
   Abstract »    Full Text »    PDF »
The Cellular Protein Daxx Interacts with Avian Sarcoma Virus Integrase and Viral DNA To Repress Viral Transcription.
J. G. Greger, R. A. Katz, A. M. Ishov, G. G. Maul, and A. M. Skalka (2005)
J. Virol. 79, 4610-4618
   Abstract »    Full Text »    PDF »
DNA Damage Sensors ATM, ATR, DNA-PKcs, and PARP-1 Are Dispensable for Human Immunodeficiency Virus Type 1 Integration.
Y. Ariumi, P. Turelli, M. Masutani, and D. Trono (2005)
J. Virol. 79, 2973-2978
   Abstract »    Full Text »    PDF »
Caffeine Inhibits Human Immunodeficiency Virus Type 1 Transduction of Nondividing Cells.
R. Daniel, E. Marusich, E. Argyris, R. Y. Zhao, A. M. Skalka, and R. J. Pomerantz (2005)
J. Virol. 79, 2058-2065
   Abstract »    Full Text »    PDF »
The Ataxia Telangiectasia-Mutated and Rad3-Related Protein Is Dispensable for Retroviral Integration.
J. L. DeHart, J. L. Andersen, E. S. Zimmerman, O. Ardon, D. S. An, J. Blackett, B. Kim, and V. Planelles (2005)
J. Virol. 79, 1389-1396
   Abstract »    Full Text »    PDF »
Analysis of Wild-Type and Mutant SL3-3 Murine Leukemia Virus Insertions in the c-myc Promoter during Lymphomagenesis Reveals Target Site Hot Spots, Virus-Dependent Patterns, and Frequent Error-Prone Gap Repair.
A. A. Nielsen, A. B. Sorensen, J. Schmidt, and F. S. Pedersen (2005)
J. Virol. 79, 67-78
   Abstract »    Full Text »    PDF »
Identification of Cellular Cofactors for Human Immunodeficiency Virus Replication via a Ribozyme-Based Genomics Approach.
S. Waninger, K. Kuhen, X. Hu, J. E. Chatterton, F. Wong-Staal, and H. Tang (2004)
J. Virol. 78, 12829-12837
   Abstract »    Full Text »    PDF »
Host Factors That Affect Ty3 Retrotransposition in Saccharomyces cerevisiae.
M. Aye, B. Irwin, N. Beliakova-Bethell, E. Chen, J. Garrus, and S. Sandmeyer (2004)
Genetics 168, 1159-1176
   Abstract »    Full Text »    PDF »
Histone H2AX Is Phosphorylated at Sites of Retroviral DNA Integration but Is Dispensable for Postintegration Repair.
R. Daniel, J. Ramcharan, E. Rogakou, K. D. Taganov, J. G. Greger, W. Bonner, A. Nussenzweig, R. A. Katz, and A. M. Skalka (2004)
J. Biol. Chem. 279, 45810-45814
   Abstract »    Full Text »    PDF »
LEDGF/p75 Determines Cellular Trafficking of Diverse Lentiviral but Not Murine Oncoretroviral Integrase Proteins and Is a Component of Functional Lentiviral Preintegration Complexes.
M. Llano, M. Vanegas, O. Fregoso, D. Saenz, S. Chung, M. Peretz, and E. M. Poeschla (2004)
J. Virol. 78, 9524-9537
   Abstract »    Full Text »    PDF »
Evidence that Stable Retroviral Transduction and Cell Survival following DNA Integration Depend on Components of the Nonhomologous End Joining Repair Pathway.
R. Daniel, J. G. Greger, R. A. Katz, K. D. Taganov, X. Wu, J. C. Kappes, and A. M. Skalka (2004)
J. Virol. 78, 8573-8581
   Abstract »    Full Text »    PDF »
Recombination at chromosomal sequences involved in leukaemogenic rearrangements is differentially regulated by p53.
G. S. Boehden, A. Restle, R. Marschalek, C. Stocking, and L. Wiesmuller (2004)
Carcinogenesis 25, 1305-1313
   Abstract »    Full Text »    PDF »
Styrylquinolines, Integrase Inhibitors Acting Prior to Integration: a New Mechanism of Action for Anti-Integrase Agents.
S. Bonnenfant, C. M. Thomas, C. Vita, F. Subra, E. Deprez, F. Zouhiri, D. Desmaele, J. d'Angelo, J. F. Mouscadet, and H. Leh (2004)
J. Virol. 78, 5728-5736
   Abstract »    Full Text »    PDF »
Human Immunodeficiency Virus Type 1 (HIV-1) Integrase: Resistance to Diketo Acid Integrase Inhibitors Impairs HIV-1 Replication and Integration and Confers Cross-Resistance to L-Chicoric Acid.
D. J. Lee and W. E. Robinson Jr. (2004)
J. Virol. 78, 5835-5847
   Abstract »    Full Text »    PDF »
Requirement for Integrase during Reverse Transcription of Human Immunodeficiency Virus Type 1 and the Effect of Cysteine Mutations of Integrase on Its Interactions with Reverse Transcriptase.
K. Zhu, C. Dobard, and S. A. Chow (2004)
J. Virol. 78, 5045-5055
   Abstract »    Full Text »    PDF »
Differential Cell Killing by Lymphomagenic Murine Leukemia Viruses Occurs Independently of p53 Activation and Mitochondrial Damage.
S. Nanua and F. K. Yoshimura (2004)
J. Virol. 78, 5088-5096
   Abstract »    Full Text »    PDF »
Azido-Containing Diketo Acid Derivatives Inhibit Human Immunodeficiency Virus Type 1 Integrase In Vivo and Influence the Frequency of Deletions at Two-Long-Terminal-Repeat-Circle Junctions.
E. S. Svarovskaia, R. Barr, X. Zhang, G. C. G. Pais, C. Marchand, Y. Pommier, T. R. Burke Jr., and V. K. Pathak (2004)
J. Virol. 78, 3210-3222
   Abstract »    Full Text »    PDF »
Unintegrated Lentivirus DNA Persistence and Accessibility to Expression in Nondividing Cells: Analysis with Class I Integrase Mutants.
D. T. Saenz, N. Loewen, M. Peretz, T. Whitwam, R. Barraza, K. G. Howell, J. M. Holmes, M. Good, and E. M. Poeschla (2004)
J. Virol. 78, 2906-2920
   Abstract »    Full Text »    PDF »
From The Cover: The base excision repair enzyme MED1 mediates DNA damage response to antitumor drugs and is associated with mismatch repair system integrity.
S. Cortellino, D. Turner, V. Masciullo, F. Schepis, D. Albino, R. Daniel, A. M. Skalka, N. J. Meropol, C. Alberti, L. Larue, et al. (2003)
PNAS 100, 15071-15076
   Abstract »    Full Text »    PDF »
Nonhomologous-End-Joining Factors Regulate DNA Repair Fidelity during Sleeping Beauty Element Transposition in Mammalian Cells.
S. R. Yant and M. A. Kay (2003)
Mol. Cell. Biol. 23, 8505-8518
   Abstract »    Full Text »    PDF »
Endogenous DNA double-strand breaks: Production, fidelity of repair, and induction of cancer.
M. M. Vilenchik and A. G. Knudson (2003)
PNAS 100, 12871-12876
   Abstract »    Full Text »    PDF »
Reversion of the Lethal Phenotype of an HIV-1 Integrase Mutant Virus by Overexpression of the Same Integrase Mutant Protein.
S. Priet, J.-M. Navarro, G. Querat, and J. Sire (2003)
J. Biol. Chem. 278, 20724-20730
   Abstract »    Full Text »    PDF »
Evidence that the retroviral DNA integration process triggers an ATR-dependent DNA damage response.
R. Daniel, G. Kao, K. Taganov, J. G. Greger, O. Favorova, G. Merkel, T. J. Yen, R. A. Katz, and A. M. Skalka (2003)
PNAS 100, 4778-4783
   Abstract »    Full Text »    PDF »
Characterization of a Cytolytic Strain of Equine Infectious Anemia Virus.
W. Maury, P. J. Wright, and S. Bradley (2003)
J. Virol. 77, 2385-2399
   Abstract »    Full Text »    PDF »
Regulatory Mechanisms by Which Barrier-to-Autointegration Factor Blocks Autointegration and Stimulates Intermolecular Integration of Moloney Murine Leukemia Virus Preintegration Complexes.
Y. Suzuki and R. Craigie (2002)
J. Virol. 76, 12376-12380
   Abstract »    Full Text »    PDF »
BRCA1 Facilitates Microhomology-mediated End Joining of DNA Double Strand Breaks.
Q. Zhong, C.-F. Chen, P.-L. Chen, and W.-H. Lee (2002)
J. Biol. Chem. 277, 28641-28647
   Abstract »    Full Text »    PDF »
Interaction of HIV-1 Integrase with DNA Repair Protein hRad18.
L. C. F. Mulder, L. A. Chakrabarti, and M. A. Muesing (2002)
J. Biol. Chem. 277, 27489-27493
   Abstract »    Full Text »    PDF »
Transduction of Interphase Cells by Avian Sarcoma Virus.
R. A. Katz, J. G. Greger, K. Darby, P. Boimel, G. F. Rall, and A. M. Skalka (2002)
J. Virol. 76, 5422-5434
   Abstract »    Full Text »    PDF »
Presteady-state Analysis of Avian Sarcoma Virus Integrase. II. REVERSE-POLARITY SUBSTRATES IDENTIFY PREFERENTIAL PROCESSING OF THE U3-U5 PAIR.
K. K. Bao, A. M. Skalka, and I. Wong (2002)
J. Biol. Chem. 277, 12099-12108
   Abstract »    Full Text »    PDF »
Ku Represses the HIV-1 Transcription. IDENTIFICATION OF A PUTATIVE Ku BINDING SITE HOMOLOGOUS TO THE MOUSE MAMMARY TUMOR VIRUS NRE1 SEQUENCE IN THE HIV-1 LONG TERMINAL REPEAT.
L. Jeanson and J.-F. Mouscadet (2002)
J. Biol. Chem. 277, 4918-4924
   Abstract »    Full Text »    PDF »
Chromosomal Integration Pattern of a Helper-Dependent Minimal Adenovirus Vector with a Selectable Marker Inserted into a 27.4-Kilobase Genomic Stuffer.
M. Hillgenberg, H. Tonnies, and M. Strauss (2001)
J. Virol. 75, 9896-9908
   Abstract »    Full Text »    PDF »
Characterization of Retrovirus-Host DNA Junctions in Cells Deficient in Nonhomologous-End Joining.
K. Taganov, R. Daniel, R. A. Katz, O. Favorova, and A. M. Skalka (2001)
J. Virol. 75, 9549-9552
   Abstract »    Full Text »    PDF »
Specific Inhibition of Human Immunodeficiency Virus Type 1 (HIV-1) Integration in Cell Culture: Putative Inhibitors of HIV-1 Integrase.
N. Vandegraaff, R. Kumar, H. Hocking, T. R. Burke Jr., J. Mills, D. Rhodes, C. J. Burrell, and P. Li (2001)
Antimicrob. Agents Chemother. 45, 2510-2516
   Abstract »    Full Text »    PDF »
Suppression of gene amplification and chromosomal DNA integration by the DNA mismatch repair system.
C.-T. Lin, Y. L. Lyu, H. Xiao, W.-H. Lin, and J. Whang-Peng (2001)
Nucleic Acids Res. 29, 3304-3310
   Abstract »    Full Text »    PDF »
Computational Analysis of Retrovirus-Induced scid Cell Death.
R. Daniel, S. Litwin, R. A. Katz, and A. M. Skalka (2001)
J. Virol. 75, 3121-3128
   Abstract »    Full Text »    PDF »
Effect Of DNA-dependent protein kinase on the molecular fate of the rAAV2 genome in skeletal muscle.
S. Song, P. J. Laipis, K. I. Berns, and T. R. Flotte (2001)
PNAS
   Abstract »    Full Text »
Poly(ADP-ribose) polymerase-1 is required for efficient HIV-1 integration.
H. C. Ha, K. Juluri, Y. Zhou, S. Leung, M. Hermankova, and S. H. Snyder (2001)
PNAS
   Abstract »    Full Text »
Wortmannin Potentiates Integrase-Mediated Killing of Lymphocytes and Reduces the Efficiency of Stable Transduction by Retroviruses.
R. Daniel, R. A. Katz, G. Merkel, J. C. Hittle, T. J. Yen, and A. M. Skalka (2001)
Mol. Cell. Biol. 21, 1164-1172
   Abstract »    Full Text »    PDF »
Integrase-LexA Fusion Proteins Incorporated into Human Immunodeficiency Virus Type 1 That Contains a Catalytically Inactive Integrase Gene Are Functional To Mediate Integration.
M. L. Holmes-Son and S. A. Chow (2000)
J. Virol. 74, 11548-11556
   Abstract »    Full Text »    PDF »
Repair of Gaps in Retroviral DNA Integration Intermediates.
K. E. Yoder and F. D. Bushman (2000)
J. Virol. 74, 11191-11200
   Abstract »    Full Text »    PDF »
DNA-Dependent Protein Kinase Is Not Required for Efficient Lentivirus Integration.
V. Baekelandt, A. Claeys, P. Cherepanov, E. De Clercq, B. De Strooper, B. Nuttin, and Z. Debyser (2000)
J. Virol. 74, 11278-11285
   Abstract »    Full Text »    PDF »
Synthesis of Virus-Specific High-Mobility DNA after Temperature Upshift of SC-1 Cells Chronically Infected with Moloney Murine Leukemia Virus Mutant ts1.
P. F. Szurek and B. R. Brooks (2000)
J. Virol. 74, 7055-7063
   Abstract »    Full Text »    PDF »
High-level expression of active HIV-1 integrase from a synthetic gene in human cells.
P. CHEREPANOV, W. PLUYMERS, A. CLAEYS, P. PROOST, E. DE CLERCQ, and Z. DEBYSER (2000)
FASEB J 14, 1389-1399
   Abstract »    Full Text »
Identification of Critical Amino Acid Residues in Human Immunodeficiency Virus Type 1 IN Required for Efficient Proviral DNA Formation at Steps prior to Integration in Dividing and Nondividing Cells.
N. Tsurutani, M. Kubo, Y. Maeda, T. Ohashi, N. Yamamoto, M. Kannagi, and T. Masuda (2000)
J. Virol. 74, 4795-4806
   Abstract »    Full Text »    PDF »
Nuclear Import of Moloney Murine Leukemia Virus DNA Mediated by Adenovirus Preterminal Protein Is Not Sufficient for Efficient Retroviral Transduction in Nondividing Cells.
A. Lieber, M. A. Kay, and Z.-Y. Li (2000)
J. Virol. 74, 721-734
   Abstract »    Full Text »    PDF »
Tagging chromatin with retrotransposons: target specificity of the Saccharomyces Ty5 retrotransposon changes with the chromosomal localization of Sir3p and Sir4p.
Y. Zhu, S. Zou, D. A. Wright, and D. F. Voytas (1999)
Genes & Dev. 13, 2738-2749
   Abstract »    Full Text »
Initial Binding of Murine Leukemia Virus Particles to Cells Does Not Require Specific Env-Receptor Interaction.
M. Pizzato, S. A. Marlow, E. D. Blair, and Y. Takeuchi (1999)
J. Virol. 73, 8599-8611
   Abstract »    Full Text »    PDF »
Involvement of DNA End-Binding Protein Ku in Ty Element Retrotransposition.
J. A. Downs and S. P. Jackson (1999)
Mol. Cell. Biol. 19, 6260-6268
   Abstract »    Full Text »    PDF »
Degradation of HIV-1 Integrase by the N-end Rule Pathway.
L. C. F. Mulder and M. A. Muesing (2000)
J. Biol. Chem. 275, 29749-29753
   Abstract »    Full Text »    PDF »
Modeling the Late Steps in HIV-1 Retroviral Integrase-catalyzed DNA Integration.
E. Brin, J. Yi, A. M. Skalka, and J. Leis (2000)
J. Biol. Chem. 275, 39287-39295
   Abstract »    Full Text »    PDF »
Role of DNA End Distortion in Catalysis by Avian Sarcoma Virus Integrase.
R. A. Katz, P. DiCandeloro, G. Kukolj, and A. M. Skalka (2001)
J. Biol. Chem. 276, 34213-34220
   Abstract »    Full Text »    PDF »
Poly(ADP-ribose) polymerase-1 is required for efficient HIV-1 integration.
H. C. Ha, K. Juluri, Y. Zhou, S. Leung, M. Hermankova, and S. H. Snyder (2001)
PNAS 98, 3364-3368
   Abstract »    Full Text »    PDF »
Effect Of DNA-dependent protein kinase on the molecular fate of the rAAV2 genome in skeletal muscle.
S. Song, P. J. Laipis, K. I. Berns, and T. R. Flotte (2001)
PNAS 98, 4084-4088
   Abstract »    Full Text »    PDF »



To Advertise     Find Products


Science. ISSN 0036-8075 (print), 1095-9203 (online)