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Science 23 October 1998: Vol. 282. no. 5389, pp. 699 - 705 DOI: 10.1126/science.282.5389.699
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Research Articles
The Transcriptional Program of Sporulation in Budding Yeast
S. Chu,
*
J. DeRisi,
*
M. Eisen,
J. Mulholland,
D. Botstein,
P. O. Brown,
I. Herskowitz
Diploid cells of budding yeast produce haploid cells through
the developmental program of sporulation, which consists of meiosis and
spore morphogenesis. DNA microarrays containing nearly every yeast gene
were used to assay changes in gene expression during sporulation. At
least seven distinct temporal patterns of induction were observed. The
transcription factor Ndt80 appeared to be important for induction of a
large group of genes at the end of meiotic prophase. Consensus
sequences known or proposed to be responsible for temporal regulation
could be identified solely from analysis of sequences of coordinately
expressed genes. The temporal expression pattern provided clues to
potential functions of hundreds of previously uncharacterized genes,
some of which have vertebrate homologs that may function during
gametogenesis.
S. Chu and I. Herskowitz, Department of Biochemistry and
Biophysics, University of California, San Francisco, San Francisco, CA
94143-0448, USA. J. DeRisi, Department of Biochemistry, Stanford
University School of Medicine, Stanford, CA 94305-5428, USA. M. Eisen,
Departments of Biochemistry and Genetics, Stanford University School of
Medicine, Stanford, CA 94305-5428, USA. J. Mulholland and D. Botstein,
Department of Genetics, Stanford University School of Medicine,
Stanford, CA 94305-5428, USA. P. O. Brown, Department of
Biochemistry and Howard Hughes Medical Institute, Stanford University
School of Medicine, Stanford, CA 94305-5428, USA.
*
These authors contributed equally to this work
To whom correspondence should be addressed. E-mail:
pbrown{at}cmgm.stanford.edu and ira{at}cgl.ucsf.edu
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- CaNdt80 Is Involved in Drug Resistance in Candida albicans by Regulating CDR1.
- C.-G. Chen, Y.-L. Yang, H.-I Shih, C.-L. Su, and H.-J. Lo (2004)
Antimicrob. Agents Chemother.
48, 4505-4512
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- CRR1, a gene encoding a putative transglycosidase, is required for proper spore wall assembly in Saccharomyces cerevisiae.
- F. Gomez-Esquer, J. M. Rodriguez-Pena, G. Diaz, E. Rodriguez, P. Briza, C. Nombela, and J. Arroyo (2004)
Microbiology
150, 3269-3280
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- Does Crossover Interference Count in Saccharomyces cerevisiae?.
- F. W. Stahl, H. M. Foss, L. S. Young, R. H. Borts, M. F. F. Abdullah, and G. P. Copenhaver (2004)
Genetics
168, 35-48
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- RSC1 and RSC2 Are Required for Expression of Mid-Late Sporulation-Specific Genes in Saccharomyces cerevisiae.
- D. Bungard, M. Reed, and E. Winter (2004)
Eukaryot. Cell
3, 910-918
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- Elucidation of Gene Interaction Networks Through Time-Lagged Correlation Analysis of Transcriptional Data.
- W. A. Schmitt Jr., R. M. Raab, and G. Stephanopoulos (2004)
Genome Res.
14, 1654-1663
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- Discovery of sequence motifs related to coexpression of genes using evolutionary computation.
- G. B. Fogel, D. G. Weekes, G. Varga, E. R. Dow, H. B. Harlow, J. E. Onyia, and C. Su (2004)
Nucleic Acids Res.
32, 3826-3835
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- Stm1p, a G4 Quadruplex and Purine Motif Triplex Nucleic Acid-binding Protein, Interacts with Ribosomes and Subtelomeric Y' DNA in Saccharomyces cerevisiae.
- M. W. Van Dyke, L. D. Nelson, R. G. Weilbaecher, and D. V. Mehta (2004)
J. Biol. Chem.
279, 24323-24333
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- Conserved and Nonconserved Proteins for Meiotic DNA Breakage and Repair in Yeasts.
- J. A. Young, R. W. Hyppa, and G. R. Smith (2004)
Genetics
167, 593-605
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