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Science 2 August 1996: Vol. 273. no. 5275, pp. 654 - 657 DOI: 10.1126/science.273.5275.654
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Reports
Demethylation-Induced Developmental Pleiotropy in
Arabidopsis
Michael J. Ronemus,
Massimo Galbiati,
Christine Ticknor,
Jychian Chen,
Stephen L. Dellaporta
*
The function of DNA methylation in higher plants was investigated
by expression of a complementary DNA encoding a cytosine
methyltransferase (MET1) from Arabidopsis thaliana as an
antisense RNA in transgenic plants. This expression resulted in a 34 to
71 percent reduction in total genomic cytosine methylation. Loss of
methylation was observed in both repetitive DNA and single-copy gene
sequences. Developmental effects included altered heterochrony, changes
in meristem identity and organ number, and female sterility. Cytosine
demethylation prolonged both vegetative and reproductive phases of
development. These findings implicate DNA methylation in establishing
or maintaining epigenetic developmental states in the meristem.
M. J. Ronemus, M. Galbiati, C. Ticknor, S. L. Dellaporta,
Department of Biology, Yale University, New Haven, CT 06520-8104, USA.
J. Chen, Academia Sinica, Taipei 11529, Taiwan.
*
To whom correspondence should be addressed.
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| Abstract »
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| Abstract »
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