Related Content
Search Google Scholar for:
|
|
Science 31 July 1992: Vol. 257. no. 5070, pp. 635 - 641 DOI: 10.1126/science.1496376
|
|
Articles
Science, Vol 257, Issue 5070, 635-641
Copyright © 1992 by American Association for the Advancement of Science
Directed evolution of an RNA enzyme
AA Beaudry
and
GF Joyce
Department of Chemistry, Scripps Research Institute, La Jolla, CA 92037.
An in vitro evolution procedure was used to obtain RNA enzymes with a particular catalytic function. A population of 10(13) variants of the Tetrahymena ribozyme, a group I ribozyme that catalyzes sequence-specific cleavage of RNA via a phosphoester transfer mechanism, was generated. This enzyme has a limited ability to cleave DNA under conditions of high temperature or high MgCl2 concentration, or both. A selection constraint was imposed on the population of ribozyme variants such that only those individuals that carried out DNA cleavage under physiologic conditions were amplified to produce "progeny" ribozymes. Mutations were introduced during amplification to maintain heterogeneity in the population. This process was repeated for ten successive generations, resulting in enhanced (100 times) DNA cleavage activity.
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- Evolution in an RNA World.
- G.F. Joyce (2009)
Cold Spring Harb Symp Quant Biol
| Abstract »
| PDF »
- A genotype-to-phenotype map of in vitro selected RNA-cleaving DNAzymes: implications for accessing the target phenotype.
- K. Schlosser, J. C. F. Lam, and Y. Li (2009)
Nucleic Acids Res.
37, 3545-3557
| Abstract »
| Full Text »
| PDF »
- Array-based evolution of DNA aptamers allows modelling of an explicit sequence-fitness landscape.
- C. G. Knight, M. Platt, W. Rowe, D. C. Wedge, F. Khan, P. J. R. Day, A. McShea, J. Knowles, and D. B. Kell (2009)
Nucleic Acids Res.
37, e6
| Abstract »
| Full Text »
| PDF »
- Anti-gene padlocks eliminate Escherichia coli based on their genotype.
- C. Shi, A. R. Parker, L. Hua, C. N. Morrell, S. C. Lee, V. Bandaru, J. S. Dumler, T. C. Wu, and J. R. Eshleman (2008)
J. Antimicrob. Chemother.
61, 262-272
| Abstract »
| Full Text »
| PDF »
- Sequence-specific cleavage of RNA in the absence of divalent metal ions by a DNAzyme incorporating imidazolyl and amino functionalities.
- A. V. Sidorov, J. A. Grasby, and D. M. Williams (2004)
Nucleic Acids Res.
32, 1591-1601
| Abstract »
| Full Text »
| PDF »
- Special Feature: Differential adsorption of nucleic acid bases: Relevance to the origin of life.
- S. J. Sowerby, C. A. Cohn, W. M. Heckl, and N. G. Holm (2001)
PNAS
98, 820-822
| Abstract »
| Full Text »
| PDF »
- Catalytic Nucleic Acids: From Lab to Applications.
- L. Q. Sun, M. J. Cairns, E. G. Saravolac, A. Baker, and W. L. Gerlach (2000)
Pharmacol. Rev.
52, 325-348
| Abstract »
| Full Text »
| PDF »
- RNA aptamers that specifically bind to a 16S ribosomal RNA decoding region construct.
- J. B.-H. Tok, J. Cho, and R. R. Rando (2000)
Nucleic Acids Res.
28, 2902-2910
| Abstract »
| Full Text »
| PDF »
- Computation with biomolecules.
- J. Chen and D. H. Wood (2000)
PNAS
97, 1328-1330
| Full Text »
| PDF »
- An important base triple anchors the substrate helix recognition surface within the Tetrahymena ribozyme active site.
- A. A. Szewczak, L. Ortoleva-Donnelly, M. V. Zivarts, A. K. Oyelere, A. V. Kazantsev, and S. A. Strobel (1999)
PNAS
96, 11183-11188
| Abstract »
| Full Text »
| PDF »
- Chemical Etiology of Nucleic Acid Structure.
- A. Eschenmoser (1999)
Science
284, 2118-2124
| Abstract »
| Full Text »
- Emergence of a dual-catalytic RNA with metal-specific cleavage and ligase activities: The spandrels of RNA evolution.
- L. F. Landweber and I. D. Pokrovskaya (1999)
PNAS
96, 173-178
| Abstract »
| Full Text »
| PDF »
- Continuity in Evolution: On the Nature of Transitions.
- W. Fontana and P. Schuster (1998)
Science
280, 1451-1455
| Abstract »
| Full Text »
- Nucleic acid enzymes: Playing with a fuller deck.
- G. F. Joyce (1998)
PNAS
95, 5845-5847
| Full Text »
| PDF »
- Kinetic Intermediates Trapped by Native Interactions in RNA Folding.
- D. K. Treiber, M. S. Rook, P. P. Zarrinkar, and J. R. Williamson (1998)
Science
279, 1943-1946
| Abstract »
| Full Text »
- RNA-peptide fusions for the in vitro selection of peptides and proteins.
- R. W. Roberts and J. W. Szostak (1997)
PNAS
94, 12297-12302
| Abstract »
| Full Text »
| PDF »
- Molding a peptide into an RNA site by in vivo peptide evolution.
- K. Harada, S. S. Martin, R. Tan, and A. D. Frankel (1997)
PNAS
94, 11887-11892
| Abstract »
| Full Text »
| PDF »
- Defining the chemical groups essential for Tetrahymena group I intron function by nucleotide analog interference mapping.
- S. A. Strobel and K. Shetty (1997)
PNAS
94, 2903-2908
| Abstract »
| Full Text »
| PDF »
- Discrimination of a single base change in a ribozyme using the gene for dihydrofolate reductase as a selective marker in Escherichia coli.
- S. Fujita, T. Koguma, J. Ohkawa, K. Mori, T. Kohda, H. Kise, S. Nishikawa, M. Iwakura, and K. Taira (1997)
PNAS
94, 391-396
| Abstract »
| Full Text »
| PDF »
- Cleavage of an amide bond by a ribozyme.
- X Dai, A De Mesmaeker, and G. Joyce (1995)
Science
267, 237-240
| Abstract »
| PDF »
- Expanding the scope of RNA catalysis.
- Prudent JR, T Uno, and P. Schultz (1994)
Science
264, 1924-1927
| Abstract »
| PDF »
- Mutagenic PCR..
- R C Cadwell and G F Joyce (1994)
Genome Res.
3, S136-S140
| PDF »
- Selection of guide sequences that direct efficient cleavage of mRNA by human ribonuclease P.
- Y Yuan and S Altman (1994)
Science
263, 1269-1273
| Abstract »
| PDF »
- Isolation of new ribozymes from a large pool of random sequences [see comment].
- D. Bartel and J. Szostak (1993)
Science
261, 1411-1418
| Abstract »
| PDF »
|
|