Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.

Site Tools

  • AAAS
  • Subscribe
  • Feedback

Site Search

Search Advanced

Science 24 April 1992:
Vol. 256. no. 5056, pp. 523 - 526
DOI: 10.1126/science.1575827

Articles

Science, Vol 256, Issue 5056, 523-526
Copyright © 1992 by American Association for the Advancement of Science


articles

X-ray structure of T4 endonuclease V: an excision repair enzyme specific for a pyrimidine dimer

K Morikawa, O Matsumoto, M Tsujimoto, K Katayanagi, M Ariyoshi, T Doi, M Ikehara, T Inaoka, and E Ohtsuka

Protein Engineering Research Institute, Osaka, Japan.

The x-ray structure of T4 endonuclease V, an enzyme responsible for the first step of a pyrimidine-dimer-specific excision-repair pathway, was determined at a 1.6-angstrom resolution. The enzyme consists of a single compact domain classified into an all-alpha structure. This single domain has two distinct catalytic activities; it functions as a pyrimidine dimer glycosylase and as an apurinic-apyrimidinic endonuclease. The amino-terminal segment penetrates between two major helices and prevents their direct contact. The refined structure suggests the residues involved in the substrate binding and the catalysis of the glycosylation reaction.


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Postnatal maturation attenuates pressure-evoked myogenic tone and stretch-induced increases in Ca2+ in rat cerebral arteries.
S. M. Charles, L. Zhang, L. D. Longo, J. N. Buchholz, and W. J. Pearce (2007)
Am J Physiol Regulatory Integrative Comp Physiol 293, R737-R744
   Abstract »    Full Text »    PDF »
Reaction Intermediates in the Catalytic Mechanism of Escherichia coli MutY DNA Glycosylase.
R. C. Manuel, K. Hitomi, A. S. Arvai, P. G. House, A. J. Kurtz, M. L. Dodson, A. K. McCullough, J. A. Tainer, and R. S. Lloyd (2004)
J. Biol. Chem. 279, 46930-46939
   Abstract »    Full Text »    PDF »
Interaction of T4 Endonuclease V with DNA: IMPORTANCE OF THE FLEXIBLE LOOP REGIONS IN PROTEIN-DNA INTERACTION.
H.-C. Ahn, T. Ohkubo, S. Iwai, K. Morikawa, and B.-J. Lee (2003)
J. Biol. Chem. 278, 30985-30992
   Abstract »    Full Text »    PDF »
Bacteriophage T4 Genome.
E. S. Miller, E. Kutter, G. Mosig, F. Arisaka, T. Kunisawa, and W. Ruger (2003)
Microbiol. Mol. Biol. Rev. 67, 86-156
   Abstract »    Full Text »    PDF »
The Catalytic Mechanism of a Pyrimidine Dimer-specific Glycosylase (pdg)/Abasic Lyase, chlorella virus-pdg.
J. F. Garvish and R. S. Lloyd (1999)
J. Biol. Chem. 274, 9786-9794
   Abstract »    Full Text »    PDF »
Characterization of a Novel cis-syn and trans-syn-II Pyrimidine Dimer Glycosylase/AP Lyase from a Eukaryotic Algal Virus, Paramecium bursaria chlorella Virus-1.
A. K. McCullough, M. T. Romberg, S. Nyaga, Y. Wei, T. G. Wood, J.-S. Taylor, J. L. Van Etten, M. L. Dodson, and R. S. Lloyd (1998)
J. Biol. Chem. 273, 13136-13142
   Abstract »    Full Text »    PDF »
The Role of Base Flipping in Damage Recognition and Catalysis by T4 Endonuclease V.
A. K. McCullough, M. L. Dodson, O. D. Scharer, and R. S. Lloyd (1997)
J. Biol. Chem. 272, 27210-27217
   Abstract »    Full Text »    PDF »
Structural Determinants for Specific Recognition by T4 Endonuclease V.
A. K. McCullough, O. Scharer, G. L. Verdine, and R. S. Lloyd (1996)
J. Biol. Chem. 271, 32147-32152
   Abstract »    Full Text »    PDF »
Studies on the Catalytic Mechanism of Five DNA Glycosylases.
B. Sun, K. A. Latham, M. L. Dodson, and R. S. Lloyd (1995)
J. Biol. Chem. 270, 19501-19508
   Abstract »    Full Text »    PDF »
Crystal structure of DNA photolyase from Escherichia coli.
H. Park, S. Kim, A Sancar, and J Deisenhofer (1995)
Science 268, 1866-1872
   Abstract »    PDF »
T4 Endonuclease V Protects the DNA Strand Opposite a Thymine Dimer from Cleavage by the Footprinting Reagents DNase I and 1,10-Phenanthroline-Copper.
K. A. Latham, J.-S. Taylor, and R. S. Lloyd (1995)
J. Biol. Chem. 270, 3765-3771
   Abstract »    Full Text »    PDF »
Involvement of Glutamic Acid 23 in the Catalytic Mechanism of T4 Endonuclease V.
R. C. Manuel, K. A. Latham, M. L. Dodson, and R. S. Lloyd (1995)
J. Biol. Chem. 270, 2652-2661
   Abstract »    Full Text »    PDF »
Atomic structure of the DNA repair [4Fe-4S] enzyme endonuclease III.
C. Kuo, D. McRee, C. Fisher, S. O'Handley, R. Cunningham, and J. Tainer (1992)
Science 258, 434-440
   Abstract »    PDF »
A stochastic algorithm for global optimization and for best populations: A test case of side chains in proteins.
M. Glick, A. Rayan, and A. Goldblum (2002)
PNAS 99, 703-708
   Abstract »    Full Text »    PDF »



To Advertise     Find Products


Science. ISSN 0036-8075 (print), 1095-9203 (online)