Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.
SNM Organization

Site Tools

  • AAAS
  • Subscribe
  • Feedback

Site Search

Search Advanced

Science 16 August 1991:
Vol. 253. no. 5021, pp. 784 - 786
DOI: 10.1126/science.1876835

Articles

Science, Vol 253, Issue 5021, 784-786
Copyright © 1991 by American Association for the Advancement of Science


articles

Specificity for aminoacylation of an RNA helix: an unpaired, exocyclic amino group in the minor groove

K Musier-Forsyth, N Usman, S Scaringe, J Doudna, R Green, and P Schimmel

Department of Biology, Massachusetts Institute of Technology, Cambridge 02139.

An acceptor stem G3.U70 base pair is a major determinant of the identity of an alanine transfer RNA. Hairpin helices and RNA duplexes consisting of complementary single strands are aminoacylated with alanine if they contain G3.U70. Chemical synthesis of RNA duplexes enabled the introduction of base analogs that tested the role of specific functional groups in the major and minor grooves of the RNA helix. The results of these experiments indicate that an unpaired guanine 2-amino group at a specific position in the minor groove of an RNA helix marks a molecule for aminoacylation with alanine.


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
The electrostatic characteristics of G{middle dot}U wobble base pairs.
D. Xu, T. Landon, N. L. Greenbaum, and M. O. Fenley (2007)
Nucleic Acids Res. 35, 3836-3847
   Abstract »    Full Text »    PDF »
Molecular basis of alanine discrimination in editing site.
M. Sokabe, A. Okada, M. Yao, T. Nakashima, and I. Tanaka (2005)
PNAS 102, 11669-11674
   Abstract »    Full Text »    PDF »
Modulation of tRNAAla identity by inorganic pyrophosphatase.
A. D. Wolfson and O. C. Uhlenbeck (2002)
PNAS 99, 5965-5970
   Abstract »    Full Text »    PDF »
Identification of Discriminator Base Atomic Groups That Modulate the Alanine Aminoacylation Reaction.
A. E. Fischer, P. J. Beuning, and K. Musier-Forsyth (1999)
J. Biol. Chem. 274, 37093-37096
   Abstract »    Full Text »    PDF »
Correlation of deformability at a tRNA recognition site and aminoacylation specificity.
K.-Y. Chang, G. Varani, S. Bhattacharya, H. Choi, and W. H. McClain (1999)
PNAS 96, 11764-11769
   Abstract »    Full Text »    PDF »
Sequences Outside Recognition Sets Are Not Neutral for tRNA Aminoacylation. EVIDENCE FOR NONPERMISSIVE COMBINATIONS OF NUCLEOTIDES IN THE ACCEPTOR STEM OF YEAST tRNAPhe.
M. Frugier, M. Helm, B. Felden, R. Giege, and C. Florentz (1998)
J. Biol. Chem. 273, 11605-11610
   Abstract »    Full Text »    PDF »
Subtle atomic group discrimination in the RNA minor groove.
M. Frugier and P. Schimmel (1997)
PNAS 94, 11291-11294
   Abstract »    Full Text »    PDF »
Specific atomic groups and RNA helix geometry in acceptor stem recognition by a tRNA synthetase.
P. J. Beuning, F. Yang, P. Schimmel, and K. Musier-Forsyth (1997)
PNAS 94, 10150-10154
   Abstract »    Full Text »    PDF »
Visualizing a Specific Contact in the HIV-1 Tat Protein Fragment and trans-Activation Responsive Region RNA Complex by Photocross-linking.
Y. Liu, Z. Wang, and T. M. Rana (1996)
J. Biol. Chem. 271, 10391-10396
   Abstract »    Full Text »    PDF »
Minor groove recognition of the conserved G.U pair at the Tetrahymena ribozyme reaction site.
S. Strobel and T. Cech (1995)
Science 267, 675-679
   Abstract »    PDF »
The transfer RNA identity problem: a search for rules.
M. Saks, Sampson JR, and J. Abelson (1994)
Science 263, 191-197
   Abstract »    PDF »
Operational RNA Code for Amino Acids in Relation to Genetic Code in Evolution.
L. Ribas de Pouplana and P. Schimmel (2001)
J. Biol. Chem. 276, 6881-6884
   Full Text »    PDF »



ADVERTISEMENT
Click Me!

ADVERTISEMENT
Click Me!

To Advertise     Find Products


Science. ISSN 0036-8075 (print), 1095-9203 (online)