Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.
Focus on Europe

Site Tools

  • AAAS
  • Subscribe
  • Feedback

Site Search

Search Advanced

Science 14 December 1990:
Vol. 250. no. 4987, pp. 1533 - 1540
DOI: 10.1126/science.2274784

Articles

Science, Vol 250, Issue 4987, 1533-1540
Copyright © 1990 by American Association for the Advancement of Science


articles

A view of interphase chromosomes

L Manuelidis

Yale Medical School, New Haven, CT 06510.

Metaphase chromosomes are dynamically modified in interphase. This review focuses on how these structures can be modified, and explores the functional mechanisms and significance of these changes. Current analyses of genes often focus on relatively short stretches of DNA and consider chromatin conformations that incorporate only a few kilobases of DNA. In interphase nuclei, however, orderly transcription and replication can involve highly folded chromosomal domains containing hundreds of kilobases of DNA. Specific "junk" DNA sequences within selected chromosome domains may participate in more complex levels of chromosome folding, and may index different genetic compartments for orderly transcription and replication. Three-dimensional chromosome positions within the nucleus may also contribute to phenotypic expression. Entire chromosomes are maintained as discrete, reasonably compact entities in the nucleus, and heterochromatic coiled domains of several thousand kilobases can acquire unique three-dimensional positions in differentiated cell types. Some aspects of neoplasia may relate to alterations in chromosome structure at several higher levels of organization.


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Dynamic changes in the epigenomic state and nuclear organization of differentiating mouse embryonic stem cells.
S. Kobayakawa, K. Miike, M. Nakao, and K. Abe (2007)
Genes Cells 12, 447-460
   Abstract »    Full Text »    PDF »
Folding and organization of a contiguous chromosome region according to the gene distribution pattern in primary genomic sequence.
L. S. Shopland, C. R. Lynch, K. A. Peterson, K. Thornton, N. Kepper, J. v. Hase, S. Stein, S. Vincent, K. R. Molloy, G. Kreth, et al. (2006)
J. Cell Biol. 174, 27-38
   Abstract »    Full Text »    PDF »
Entropy-Driven Genome Organization.
D. Marenduzzo, C. Micheletti, and P. R. Cook (2006)
Biophys. J. 90, 3712-3721
   Abstract »    Full Text »    PDF »
Homologous pairing of 15q11-13 imprinted domains in brain is developmentally regulated but deficient in Rett and autism samples.
K. N. Thatcher, S. Peddada, D. H. Yasui, and J. M. LaSalle (2005)
Hum. Mol. Genet. 14, 785-797
   Abstract »    Full Text »    PDF »
Satellite DNA binding and cellular localisation of RNA helicase P68.
N. Enukashvily, R. Donev, D. Sheer, and O. Podgornaya (2005)
J. Cell Sci. 118, 611-622
   Abstract »    Full Text »    PDF »
Alteration of chromosome positioning during adipocyte differentiation.
M. Kuroda, H. Tanabe, K. Yoshida, K. Oikawa, A. Saito, T. Kiyuna, H. Mizusawa, and K. Mukai (2004)
J. Cell Sci. 117, 5897-5903
   Abstract »    Full Text »    PDF »
Mouse centric and pericentric satellite repeats form distinct functional heterochromatin.
M. Guenatri, D. Bailly, C. Maison, and G. Almouzni (2004)
J. Cell Biol. 166, 493-505
   Abstract »    Full Text »    PDF »
The Mitotic Chromosome Is an Assembly of Rigid Elastic Axes Organized by Structural Maintenance of Chromosomes (SMC) Proteins and Surrounded by a Soft Chromatin Envelope.
S. Almagro, D. Riveline, T. Hirano, B. Houchmandzadeh, and S. Dimitrov (2004)
J. Biol. Chem. 279, 5118-5126
   Abstract »    Full Text »    PDF »
The Detection of t(14;18) in Archival Lymph Nodes: Development of a Fluorescence in Situ Hybridization (FISH)-Based Method and Evaluation by Comparison with Polymerase Chain Reaction.
S. L. Barrans, P. A.S. Evans, S. J.M. O'Connor, R. G. Owen, G. J. Morgan, and A. S. Jack (2003)
J. Mol. Diagn. 5, 168-175
   Abstract »    Full Text »    PDF »
A Polymer Model for Large-scale Chromatin Organization in Lower Eukaryotes.
J. Ostashevsky (2002)
Mol. Biol. Cell 13, 2157-2169
   Abstract »    Full Text »    PDF »
Evolutionary conservation of chromosome territory arrangements in cell nuclei from higher primates.
H. Tanabe, S. Muller, M. Neusser, J. von Hase, E. Calcagno, M. Cremer, I. Solovei, C. Cremer, and T. Cremer (2002)
PNAS 99, 4424-4429
   Abstract »    Full Text »    PDF »
Alteration of nuclear architecture in male germ cells of chromosomally derived subfertile mice.
S. Garagna, M. Zuccotti, A. Thornhill, R. Fernandez-Donoso, S. Berrios, E. Capanna, and C. A. Redi (2002)
J. Cell Sci. 114, 4429-4434
   Abstract »    Full Text »    PDF »
Chromosomal G-dark Bands Determine the Spatial Organization of Centromeric Heterochromatin in the Nucleus.
C. Carvalho, H. M. Pereira, J. Ferreira, C. Pina, D. Mendonca, A. C. Rosa, and M. Carmo-Fonseca (2001)
Mol. Biol. Cell 12, 3563-3572
   Abstract »    Full Text »    PDF »
Radiation-induced chromosome aberrations in human euchromatic (17cen-p53) and heterochromatic (1cen-1q12) regions.
S. Puerto, M.J. Ramirez, R. Marcos, A. Creus, and J. Surralles (2001)
Mutagenesis 16, 291-296
   Abstract »    Full Text »    PDF »
Cytoplasmic microtubular system implicated in de novo formation of a Rabl-like orientation of chromosomes in fission yeast.
B. Goto, K. Okazaki, and O. Niwa (2001)
J. Cell Sci. 114, 2427-2435
   Abstract »    Full Text »    PDF »
Telomere associations in interphase nuclei: possible role in maintenance of interphase chromosome topology.
R. Nagele, A. Velasco, W. Anderson, D. McMahon, Z Thomson, J Fazekas, K Wind, and H Lee (2001)
J. Cell Sci. 114, 377-388
   Abstract »    PDF »
Crossing Over Is Rarely Associated With Mitotic Intragenic Recombination in Schizosaccharomyces pombe.
J. B. Virgin, J. P. Bailey, F. Hasteh, J. Neville, A. Cole, and G. Tromp (2001)
Genetics 157, 63-77
   Abstract »    Full Text »
D-Titin: a Giant Protein with Dual Roles in Chromosomes and Muscles.
Machado and D. Andrew (2000)
J. Cell Biol. 151, 639-652
   Abstract »    Full Text »    PDF »
Half a Century of "The Nuclear Matrix".
T. Pederson (2000)
Mol. Biol. Cell 11, 799-805
   Abstract »    Full Text »
Spatial associations of centromeres in the nuclei of hematopoietic cells: evidence for cell-type-specific organizational patterns.
I. Alcobia, R. Dilao, and L. Parreira (2000)
Blood 95, 1608-1615
   Abstract »    Full Text »    PDF »
Genomes and Form: The Case for Teleomorphic Recursivity.
R. VON STERNBERG (2000)
Ann. N.Y. Acad. Sci. 901, 224-236
   Abstract »    Full Text »    PDF »
Spatial Relationship between Transcription Sites and Chromosome Territories.
P. J. Verschure, I. van der Kraan, E. M.M. Manders, and R. van Driel (1999)
J. Cell Biol. 147, 13-24
   Abstract »    Full Text »    PDF »
Nuclear Organization of Mammalian Genomes: Polar Chromosome Territories Build Up Functionally Distinct Higher Order Compartments.
N. Sadoni, S. Langer, C. Fauth, G. Bernardi, T. Cremer, B. M. Turner, and D. Zink (1999)
J. Cell Biol. 146, 1211-1226
   Abstract »    Full Text »    PDF »
Association of Chromosome Territories with the Nuclear Matrix: Disruption of Human Chromosome Territories Correlates with the Release of a Subset of Nuclear Matrix Proteins.
H. Ma, A. J. Siegel, and R. Berezney (1999)
J. Cell Biol. 146, 531-542
   Abstract »    Full Text »    PDF »
Large-Scale Chromatin Unfolding and Remodeling Induced by VP16 Acidic Activation Domain.
T. Tumbar, G. Sudlow, and A. S. Belmont (1999)
J. Cell Biol. 145, 1341-1354
   Abstract »    Full Text »    PDF »
Differences in the Localization and Morphology of Chromosomes in the Human Nucleus.
J. A. Croft, J. M. Bridger, S. Boyle, P. Perry, P. Teague, and W. A. Bickmore (1999)
J. Cell Biol. 145, 1119-1131
   Abstract »    Full Text »    PDF »
Elasticity Measurements Show the Existence of Thin Rigid Cores Inside Mitotic Chromosomes.
B. Houchmandzadeh and S. Dimitrov (1999)
J. Cell Biol. 145, 215-223
   Abstract »    Full Text »    PDF »
The Nuclear Topography of ABL, BCR, PML, and RARalpha Genes: Evidence for Gene Proximity in Specific Phases of the Cell Cycle and Stages of Hematopoietic Differentiation.
H. Neves, C. Ramos, M. G. da Silva, A. Parreira, and L. Parreira (1999)
Blood 93, 1197-1207
   Abstract »    Full Text »    PDF »
Chromosomes exhibit preferential positioning in nuclei of quiescent human cells.
R. Nagele, T Freeman, L McMorrow, Z Thomson, K Kitson-Wind, and H. Lee (1999)
J. Cell Sci. 112, 525-535
   Abstract »    PDF »
Spatial and Temporal Dynamics of DNA Replication Sites in Mammalian Cells.
H. Ma, J. Samarabandu, R. S. Devdhar, R. Acharya, P.-c. Cheng, C. Meng, and R. Berezney (1998)
J. Cell Biol. 143, 1415-1425
   Abstract »    Full Text »    PDF »
Large-scale Chromosomal Movements During Interphase Progression in Drosophila.
A. K. Csink and S. Henikoff (1998)
J. Cell Biol. 143, 13-22
   Abstract »    Full Text »    PDF »
p21WAF-1 reorganizes the nucleus in tumor suppression.
G. Linares-Cruz, H. Bruzzoni-Giovanelli, V. Alvaro, J.-P. Roperch, M. Tuynder, D. Schoevaert, M. Nemani, S. Prieur, F. Lethrosne, L. Piouffre, et al. (1998)
PNAS 95, 1131-1135
   Abstract »    Full Text »    PDF »
Spatial Organization of Large-Scale Chromatin Domains in the Nucleus: A Magnified View of Single Chromosome Territories.
J. Ferreira, G. Paolella, C. Ramos, and A. I. Lamond (1997)
J. Cell Biol. 139, 1597-1610
   Abstract »    Full Text »    PDF »
Electron Tomography of Metaphase Nucleolar Organizer Regions: Evidence for a Twisted-Loop Organization.
L. Heliot, H. Kaplan, L. Lucas, C. Klein, A. Beorchia, M. Doco-Fenzy, M. Menager, M. Thiry, M.-F. O'Donohue, and D. Ploton (1997)
Mol. Biol. Cell 8, 2199-2216
   Abstract »    Full Text »
Elasticity and Structure of Eukaryote Chromosomes Studied by Micromanipulation and Micropipette Aspiration.
B. Houchmandzadeh, J. F. Marko, D. Chatenay, and A. Libchaber (1997)
J. Cell Biol. 139, 1-12
   Abstract »    Full Text »    PDF »
Chromatin Dynamics in Interphase Nuclei and Its Implications for Nuclear Structure.
J. R. Abney, B. Cutler, M. L. Fillbach, D. Axelrod, and B. A. Scalettar (1997)
J. Cell Biol. 137, 1459-1468
   Abstract »    Full Text »    PDF »
Distribution of ABL and BCR Genes in Cell Nuclei of Normal and Irradiated Lymphocytes.
S. Kozubek, L. Ryznar, M. Kozubek, R.D. Govorun, E.A. Krasavin, and G. Horneck (1997)
Blood 89, 4537-4545
   Abstract »    Full Text »    PDF »
Lack of chromosome territoriality in yeast: Promiscuous rejoining of broken chromosome ends.
J. E. Haber and W.-Y. Leung (1996)
PNAS 93, 13949-13954
   Abstract »    Full Text »    PDF »
Precise Spatial Positioning of Chromosomes During Prometaphase: Evidence for Chromosomal Order.
R. Nagele, T. Freeman, L. McMorrow, and H.-y. Lee (1995)
Science 270, 1831-1835
   Abstract »    PDF »
A chromomeric model for nuclear and chromosome structure.
P. Cook (1995)
J. Cell Sci. 108, 2927-2935
   Abstract »    PDF »



ADVERTISEMENT
Click Me!

ADVERTISEMENT
Click Me!

To Advertise     Find Products


Science. ISSN 0036-8075 (print), 1095-9203 (online)