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Science 23 October 1987:
Vol. 238. no. 4826, pp. 486 - 491
DOI: 10.1126/science.3310236

Articles

Science, Vol 238, Issue 4826, 486-491
Copyright © 1987 by American Association for the Advancement of Science


articles

Computer-aided molecular design

JA McCammon

Department of Chemistry, University of Houston, TX 77004.

Theoretical chemistry, as implemented on fast computers, is beginning to yield accurate predictions of the thermodynamic and kinetic properties of large molecular assemblies. In addition to providing detailed insights into the origins of molecular activity, theoretical calculations can be used to design new molecules with specific properties. This article describes two types of calculations that show special promise as design tools, the thermodynamic cycle-perturbation method and the Brownian reactive dynamics method. These methods can be applied to calculate equilibrium and rate constants that describe many aspects of molecular recognition, stability, and reactivity.


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Finite Element Analysis of the Time-Dependent Smoluchowski Equation for Acetylcholinesterase Reaction Rate Calculations.
Y. Cheng, J. K. Suen, D. Zhang, S. D. Bond, Y. Zhang, Y. Song, N. A. Baker, C. L. Bajaj, M. J. Holst, and J. A. McCammon (2007)
Biophys. J. 92, 3397-3406
   Abstract »    Full Text »    PDF »
Finite Element Solution of the Steady-State Smoluchowski Equation for Rate Constant Calculations.
Y. Song, Y. Zhang, T. Shen, C. L. Bajaj, J. A. McCammon, and N. A. Baker (2004)
Biophys. J. 86, 2017-2029
   Abstract »    Full Text »    PDF »
New sequencers to take on the genome.
L Roberts (1987)
Science 238, 271-273
   PDF »



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Science. ISSN 0036-8075 (print), 1095-9203 (online)